RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 A0A087WWV3 80 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 SMTNL1A8MU46 457 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 ADCY7P51828 1080 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 PLCB2Q00722 1185 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 A0A087X0B3 334 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 GOLGA6L6A8MZA4 724 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 TCP10L2B9ZVM9 353 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 NFKBIEO00221 500 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 BIN1O00499 593 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 SLC1A4P43007 532 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 TNIP1Q15025 636 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 E2F4Q16254 413 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 NEK8Q86SG6 692 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 AOPEPQ8N6M6 819 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 JDP2Q8WYK2 163 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 TRIM5Q9C035 493 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 GLT8D2Q9H1C3 349 aa16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.27■□□□□ 0.19
RTFDC1-201ENST00000023939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 CLRN2A0PK11 232 aa16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 FOXN1O15353 648 aa16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 PPP1R11O60927 126 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 RPS12P25398 132 aaKnown RBP16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 ZNF280AP59817 542 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 MAP3K10Q02779 954 aa16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 RRP1BQ14684 758 aaKnown RBP16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 CT47A1Q5JQC4 288 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 DTHD1Q6ZMT9 781 aa16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 IQUBQ8NA54 791 aa16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 MAN1B1Q9UKM7 699 aa16.26■□□□□ 0.19
RTFDC1-201ENST00000023939 USP17L10C9JJH3 530 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 F5H6K3 240 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 MYO1BO43795 1136 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 SMC2O95347 1197 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 GDF11O95390 407 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 GH2P01242 217 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 MSNP26038 577 aaKnown RBP16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 CLK2P49760 499 aaKnown RBP16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 JAG1P78504 1218 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 KLRC3Q07444 240 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 MORC3Q14149 939 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 NCAPHQ15003 741 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 BTNL9Q6UXG8 535 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 KCTD1Q719H9 257 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 PDILTQ8N807 584 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 MLKLQ8NB16 471 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 COA7Q96BR5 231 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 DHX58Q96C10 678 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 PAGE5Q96GU1 130 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 PGAP2Q9UHJ9 254 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 ZNF500O60304 480 aaPredicted RBP16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 NDUFB10O96000 172 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 MRPL12P52815 198 aaKnown RBP16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 AK8Q96MA6 479 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 CCSER1Q9C0I3 900 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 TMEM60Q9H2L4 133 aa16.25■□□□□ 0.19
RTFDC1-201ENST00000023939 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 PRR29P0C7W0 189 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 BMP6P22004 513 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 SLC16A2P36021 539 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 TXLNAP40222 546 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 TPM4P67936 248 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 TEX2Q8IWB9 1127 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 DACH1Q9UI36 760 aa16.24■□□□□ 0.19
RTFDC1-201ENST00000023939 OR52Z1P0C646 297 aa16.23■□□□□ 0.19
RTFDC1-201ENST00000023939 R3HDM1Q15032 1099 aaKnown RBP16.23■□□□□ 0.19
RTFDC1-201ENST00000023939 PDXDC2PQ6P474 469 aa16.23■□□□□ 0.19
RTFDC1-201ENST00000023939 CUL5Q93034 780 aa16.23■□□□□ 0.19
RTFDC1-201ENST00000023939 GSDMAQ96QA5 445 aa16.23■□□□□ 0.19
RTFDC1-201ENST00000023939 MYOZ2Q9NPC6 264 aa16.23■□□□□ 0.19
RTFDC1-201ENST00000023939 BIN2Q9UBW5 565 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-201ENST00000023939 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.195e-6■■□□□ 11.7
RTFDC1-201ENST00000023939 WNT10BO00744 389 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 NEMFO60524 1076 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 MYL5Q02045 173 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 DPYDQ12882 1025 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 QRICH1Q2TAL8 776 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 LETM2Q2VYF4 491 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 JAKMIP3Q5VZ66 844 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 MCTP2Q6DN12 878 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 ARHGEF10LQ9HCE6 1279 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 TMX2Q9Y320 296 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 CCNT1O60563 726 aaKnown RBP16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 BMP3P12645 472 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 PTGER2P43116 358 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 CDC37Q16543 378 aaPredicted RBP16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 PPP4R3AQ6IN85 833 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 DPF2Q92785 391 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 PSTPIP2Q9H939 334 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 VEZTQ9HBM0 779 aa16.22■□□□□ 0.19
RTFDC1-201ENST00000023939 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms