RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Inf2Q0GNC1 1273 aa12.52□□□□□ -0.4
Chd3-202ENSMUST00000108661 Caps2Q8BUG5 550 aa12.52□□□□□ -0.4
Chd3-202ENSMUST00000108661 Tbc1d22aQ8R5A6 516 aa12.52□□□□□ -0.4
Chd3-202ENSMUST00000108661 Pold3Q9EQ28 462 aa12.52□□□□□ -0.4
Chd3-202ENSMUST00000108661 Kif14L0N7N1 1674 aaKnown RBP12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 CaluO35887 315 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Actn3O88990 900 aaKnown RBP12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Snap25P60879 206 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Inpp5fQ8CDA1 1132 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Pspc1Q8R326 523 aaKnown RBP12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ccdc70Q9D9B0 223 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Foxp4Q9DBY0 795 aaKnown RBP12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Gbp2Q9Z0E6 589 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Gm2163Q6PCY5 473 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Gpr101Q80T62 511 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Iqcb1Q8BP00 598 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ppfibp1Q8C8U0 969 aaKnown RBP12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Kctd10Q922M3 315 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Mrpl11Q9CQF0 192 aaKnown RBP12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 CacybpQ9CXW3 229 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Nup62clA2AG10 272 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Taf4E9QAP7 1042 aaKnown RBP12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Stxbp2Q64324 593 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 C8aQ8K182 587 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ppp4r1Q8K2V1 951 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Rassf9Q8K342 435 aa12.52□□□□□ -0.41
Chd3-202ENSMUST00000108661 Scaf11E9PZM7 1456 aaKnown RBP12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Rbm41Q8JZV4 413 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Plcd1Q8R3B1 756 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Pcdhb12Q91Y07 789 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Fam135bQ9DAI6 1403 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Rmdn1Q9DCV4 305 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Atp6v0d2Q80SY3 350 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ttll4Q80UG8 1193 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Prpf40bQ80W14 870 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Krt17Q9QWL7 433 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Atp12aQ9Z1W8 1035 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ubn2Q80WC1 1314 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 HunkO88866 714 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 CtcfQ61164 736 aaKnown RBP12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Bicdl2Q8CHW5 507 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Sdr42e1Q9D665 394 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 CltcQ68FD5 1675 aaKnown RBP12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Sos2Q02384 1333 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Q9D1F3 157 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Akap8Q9DBR0 687 aaKnown RBP12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Cpsf3Q9QXK7 684 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Fem1bQ9Z2G0 627 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Npc1l1Q6T3U4 1333 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Orc4O88708 433 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Myl1P05977 188 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Krt32Q62168 407 aa12.51□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ezh2Q61188 746 aaKnown RBP12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Tll1Q62381 1013 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ncoa7Q6DFV7 943 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Atp2a1Q8R429 994 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Glis3Q6XP49 780 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 PycardQ9EPB4 193 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Sik3Q6P4S6 1311 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Gdap1O88741 358 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Krt14Q61781 484 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Snx13Q6PHS6 957 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Sass6Q80UK7 654 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Msh6P54276 1358 aaKnown RBP12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Mroh8E9PYI4 1049 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Pcdha4O88689 947 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 MybP06876 636 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Elp3Q9CZX0 547 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Sorbs3Q9R1Z8 733 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Hspd1P63038 573 aaKnown RBP12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Gse1Q3U3C9 1213 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 RimklbQ80WS1 387 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Cep128Q8BI22 1102 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Terb1Q8C0V1 768 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Kat14Q8CID0 779 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Mettl7bQ9DD20 244 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Gm5624F6ZZG8 207 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 NelfbQ8C4Y3 580 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 Dynll2Q9D0M5 89 aa12.5□□□□□ -0.41
Chd3-202ENSMUST00000108661 SelenovD3YXG1 328 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 IvlP48997 467 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Eef1dP57776 281 aaKnown RBP12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Trim21Q62191 470 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Cdk8Q8R3L8 464 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Lrrc74aA0A1Y7VMD6 494 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Zkscan16A2ALW2 728 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Slc12a2P55012 1205 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Pfdn6Q03958 127 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Trak2Q6P9N8 913 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Cdc26Q99JP4 85 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 4931400O07RikQ9D4M5 137 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Kcnh4A2A5F7 1018 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Gm13023A2A8N2 498 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Vwa3bJ9JI28 736 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ces1eQ64176 562 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Ces1fQ91WU0 561 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Tktl2Q9D4D4 627 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Mbd5B1AYB6 1498 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 Zbtb7bQ64321 544 aa12.49□□□□□ -0.41
Chd3-202ENSMUST00000108661 KaznQ69ZS8 779 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms