RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Itgb4A2A863 1818 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Scn9aQ62205 1984 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Odf2A3KGV1 830 aaKnown RBP11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Ppfibp2O35711 882 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 GabrdP22933 449 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Bbof1Q3V079 533 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Ezh2Q61188 746 aaKnown RBP11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Krit1Q6S5J6 736 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Spag7Q7TNE3 227 aaKnown RBP11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Ccdc122Q8BVN0 290 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Fermt2Q8CIB5 680 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Dnajc17Q91WT4 303 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Scrn1Q9CZC8 414 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Pex3Q9QXY9 372 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 Mapk8ip1Q9WVI9 707 aa11.7□□□□□ -0.54
Tro-201ENSMUST00000087253 1700029H14RikE9PY36 240 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Slc39a2G3X943 309 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Atp8b1Q148W0 1251 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Ccdc181Q80ZU5 509 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Taok3Q8BYC6 898 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Tmem60Q8K174 133 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Gimap7Q8R379 293 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Grin3bQ91ZU9 1003 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 NsmfQ99NF2 532 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 NgdnQ9DB96 315 aaKnown RBP11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Lgr5Q9Z1P4 907 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Bicdl1A0JNT9 577 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Parp1P11103 1013 aaKnown RBP11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Tubb4bP68372 445 aaKnown RBP11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Gpbp1Q6NXH3 473 aaKnown RBP11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Lrsam1Q80ZI6 727 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Sh3bp5lQ99LH9 392 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Abhd2Q9QXM0 425 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Ccdc24E9PUW8 296 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Prl2c3P04768 224 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 RaraP11416 462 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Slc12a2P55012 1205 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Atp1b3P97370 278 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Fam83bQ0VBM2 1012 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Aggf1Q7TN31 711 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Epha10Q8BYG9 1007 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Eps8l1Q8R5F8 716 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Eif4enif1Q9EST3 983 aaKnown RBP11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Nrxn2E9Q7X7 1710 aa11.69□□□□□ -0.54
Tro-201ENSMUST00000087253 Zfp853A0A1D5RM95 733 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Izumo3A6PWV3 263 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Arhgap4B1AUY3 965 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Krt78E9Q0F0 1068 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Nfil3O08750 462 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Ddx3yQ62095 658 aaKnown RBP11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Antxr2Q6DFX2 487 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Jade2Q6ZQF7 829 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Q91WD4 421 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Eps8l2Q99K30 729 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Psmd14O35593 310 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Stag2O35638 1231 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Akap2O54931 893 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Slc9a1Q61165 820 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Asic1Q6NXK8 526 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Nyap1Q6PFX7 833 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Lrrn2Q6PHP6 730 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Tekt3Q6X6Z7 490 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 D130040H23RikQ8BII3 405 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 RadxQ8C779 850 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 RarsQ9D0I9 660 aaKnown RBP11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Ubxn8Q9QZ49 277 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Tsc2Q61037 1814 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Psme4Q5SSW2 1843 aa11.68□□□□□ -0.54
Tro-201ENSMUST00000087253 Rhbdl3P58873 404 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Ccdc148Q6P5U8 527 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Kdm1aQ6ZQ88 853 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Def6Q8C2K1 630 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Pspc1Q8R326 523 aaKnown RBP11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 MlphQ91V27 590 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 CutaQ9CQ89 177 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Ribc1Q9D0B8 379 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Mss51Q9D5Z5 446 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Myh6Q02566 1938 aaKnown RBP11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Scgb2b11A0A087WR49 112 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Gm36210A0A1B0GS00 229 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Fam186bD3Z420 943 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Serpina16D3Z660 418 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Calm1P0DP26 149 aaKnown RBP11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Calm2P0DP27 149 aaKnown RBP11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Calm3P0DP28 149 aaKnown RBP11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Sec31aQ3UPL0 1230 aaKnown RBP11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Zc3h12cQ5DTV4 884 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Ccdc42Q5SV66 316 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Ppp2r5bQ6PD28 497 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Cct8l1Q80YT3 562 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Q8BT18 775 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Tmem134Q8R0J4 195 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Tut1Q8R3F9 869 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 EpgnQ924X1 152 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Ambra1A2AH22 1300 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Trim55G3X8Y1 545 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Snx12O70493 165 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Wee1P47810 646 aa11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Ssrp1Q08943 708 aaKnown RBP11.67□□□□□ -0.54
Tro-201ENSMUST00000087253 Ppm1eQ80TL0 749 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms