RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 UMODL1Q5DID0 1318 aa9.55□□□□□ -0.88
PHGDH-217ENST00000641455 PRR33A8MZF0 331 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 PI4K2BG5E9Z4 385 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 CST5P28325 142 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-217ENST00000641455 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-217ENST00000641455 STAT3P40763 770 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 ZAP70P43403 619 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 SLC4A3P48751 1232 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 PLCD1P51178 756 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 CCSAPQ6IQ19 270 aaPredicted RBP9.54□□□□□ -0.88
PHGDH-217ENST00000641455 NOL8Q76FK4 1167 aaKnown RBP9.54□□□□□ -0.88
PHGDH-217ENST00000641455 CERS3Q8IU89 383 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 RIOX2Q8IUF8 465 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 CLEC10AQ8IUN9 316 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 RPUSD2Q8IZ73 545 aaKnown RBP9.54□□□□□ -0.88
PHGDH-217ENST00000641455 MAGEB6Q8N7X4 407 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 DDX11Q96FC9 970 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 DBNDD2Q9BQY9 259 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 SH2D4AQ9H788 454 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 CHD9Q3L8U1 2897 aa9.54□□□□□ -0.88
PHGDH-217ENST00000641455 NAV1Q8NEY1 1877 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 WDR46O15213 610 aaKnown RBP9.53□□□□□ -0.88
PHGDH-217ENST00000641455 SNAI1O95863 264 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-217ENST00000641455 COPB2P35606 906 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 NHLH1Q02575 133 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 ICA1Q05084 483 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 OS9Q13438 667 aaPredicted RBP9.53□□□□□ -0.88
PHGDH-217ENST00000641455 TMEM179Q6ZVK1 233 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 MSL3Q8N5Y2 521 aaKnown RBP9.53□□□□□ -0.88
PHGDH-217ENST00000641455 API5Q9BZZ5 524 aaKnown RBP9.53□□□□□ -0.88
PHGDH-217ENST00000641455 VCPKMTQ9H867 229 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 FBXO28Q9NVF7 368 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 PARP14Q460N5 1801 aa9.53□□□□□ -0.88
PHGDH-217ENST00000641455 EPOPA6NHQ4 379 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 CD4P01730 458 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 GNAI3P08754 354 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 POU3F3P20264 500 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-217ENST00000641455 GJA9P57773 515 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 BEX3Q00994 111 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 ACVR2BQ13705 512 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 CCDC144BQ3MJ40 725 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 ALDH1L2Q3SY69 923 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 CXCL17Q6UXB2 119 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 FAM9BQ8IZU0 186 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 SCLYQ96I15 445 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 NOC4LQ9BVI4 516 aaKnown RBP9.52□□□□□ -0.89
PHGDH-217ENST00000641455 WNT8AQ9H1J5 351 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 CD320Q9NPF0 282 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 MCM9Q9NXL9 1143 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-217ENST00000641455 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.89
PHGDH-217ENST00000641455 CHD7Q9P2D1 2997 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 MYH8P13535 1937 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 MCM3APO60318 1980 aa9.52□□□□□ -0.89
PHGDH-217ENST00000641455 VWA5AO00534 786 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 ADCY6O43306 1168 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 IGSF3O75054 1194 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 GRB10Q13322 594 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 MTX1Q13505 466 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 ITGA7Q13683 1181 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 TTLL4Q14679 1199 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 TNNI3KQ59H18 835 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 SNRNP48Q6IEG0 339 aaKnown RBP9.51□□□□□ -0.89
PHGDH-217ENST00000641455 DEFB128Q7Z7B8 93 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 GJD3Q8N144 294 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 FBXL18Q96ME1 805 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 TRPV6Q9H1D0 765 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 UPF3AQ9H1J1 476 aaKnown RBP9.51□□□□□ -0.89
PHGDH-217ENST00000641455 TMX2Q9Y320 296 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 CTDP1Q9Y5B0 961 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-217ENST00000641455 FPGT-TNNI3KV9GXZ4 949 aa9.51□□□□□ -0.89
PHGDH-217ENST00000641455 BRWD1Q9NSI6 2320 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 KIF28PB7ZC32 967 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 CABYRO75952 493 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 ACTN1P12814 892 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 ALADP13716 330 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 AKR1B1P15121 316 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 EVX2Q03828 476 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 GABPAQ06546 454 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 FAM83BQ5T0W9 1011 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 MAMDC4Q6UXC1 1216 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 TEX13BQ9BXU2 312 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 CRNKL1Q9BZJ0 848 aaKnown RBP9.5□□□□□ -0.89
PHGDH-217ENST00000641455 ABHD16BQ9H3Z7 469 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 ZNF214Q9UL59 606 aaPredicted RBP9.5□□□□□ -0.89
PHGDH-217ENST00000641455 PPP1R9AQ9ULJ8 1098 aa9.5□□□□□ -0.89
PHGDH-217ENST00000641455 REV3LO60673 3130 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 COL4A4P53420 1690 aaPredicted RBP9.49□□□□□ -0.89
PHGDH-217ENST00000641455 PNMA6EA0A0J9YXQ4 647 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 E9PSI1 815 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 ZEB2O60315 1214 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 B4GALT4O60513 344 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 PFKMP08237 780 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 CYP2D6P10635 497 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 TNFAIP2Q03169 654 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 TAP1Q03518 808 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 ARMCX2Q7L311 632 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 CPXCR1Q8N123 301 aa9.49□□□□□ -0.89
PHGDH-217ENST00000641455 GDPD5Q8WTR4 605 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms