RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
MACF1-235ENST00000641104 EAPPQ56P03 285 aaPredicted RBP13.2□□□□□ -0.3
MACF1-235ENST00000641104 CASC4Q6P4E1 433 aa13.2□□□□□ -0.3
MACF1-235ENST00000641104 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
MACF1-235ENST00000641104 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
MACF1-235ENST00000641104 ZFYVE16Q7Z3T8 1539 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 LOC102724428A0A0B4J2F2 783 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 SIK1P57059 783 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 LONRF2Q1L5Z9 754 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 NLGN1Q8N2Q7 840 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 DOK7Q18PE1 504 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 GBP6Q6ZN66 633 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 SAR1BQ9Y6B6 198 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 K7ENM7 598 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 KRT15P19012 456 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 ADKP55263 362 aaKnown RBP13.19□□□□□ -0.3
MACF1-235ENST00000641104 PPFIA1Q13136 1202 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 GREM2Q9H772 168 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
MACF1-235ENST00000641104 MTMR6Q9Y217 621 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 I3L4J1 428 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 LPXNO60711 386 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 FOSP01100 380 aaPredicted RBP13.19□□□□□ -0.3
MACF1-235ENST00000641104 CEP85LQ5SZL2 805 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 USPL1Q5W0Q7 1092 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 FAM178BQ8IXR5 827 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 METTL14Q9HCE5 456 aaKnown RBP13.19□□□□□ -0.3
MACF1-235ENST00000641104 TNNC2P02585 160 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
MACF1-235ENST00000641104 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 PLA2G4DQ86XP0 818 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
MACF1-235ENST00000641104 SND1Q7KZF4 910 aaKnown RBP eCLIP13.18□□□□□ -0.3
MACF1-235ENST00000641104 SDCCAG8Q86SQ7 713 aaPredicted RBP13.18□□□□□ -0.3
MACF1-235ENST00000641104 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.3
MACF1-235ENST00000641104 ADPGKQ9BRR6 497 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 C1orf112Q9NSG2 853 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 AATKQ6ZMQ8 1374 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 XDHP47989 1333 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 NR1I2O75469 434 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 ZWINTO95229 277 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 PPP2R5EQ16537 467 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 GKAP1Q5VSY0 366 aaPredicted RBP13.18□□□□□ -0.3
MACF1-235ENST00000641104 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
MACF1-235ENST00000641104 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 RSRC1Q96IZ7 334 aaKnown RBP13.18□□□□□ -0.3
MACF1-235ENST00000641104 CCDC17Q96LX7 622 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 ATF7P17544 494 aaPredicted RBP13.18□□□□□ -0.3
MACF1-235ENST00000641104 PHKA1P46020 1223 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
MACF1-235ENST00000641104 WHAMMP3Q1A5X7 153 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 DENND2CQ68D51 928 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 P3H4Q92791 437 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 PALD1Q9ULE6 856 aa13.18□□□□□ -0.3
MACF1-235ENST00000641104 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
MACF1-235ENST00000641104 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
MACF1-235ENST00000641104 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 VPS37BQ9H9H4 285 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 VSIG1Q86XK7 387 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 C17orf53Q8N3J3 647 aaPredicted RBP13.17□□□□□ -0.3
MACF1-235ENST00000641104 RSAD2Q8WXG1 361 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 MIS12Q9H081 205 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 TBC1D8O95759 1140 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 HADHQ16836 314 aaKnown RBP13.17□□□□□ -0.3
MACF1-235ENST00000641104 CACNA2D3Q8IZS8 1091 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 STAP2Q9UGK3 403 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 RGS12O14924 1447 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 RPN1P04843 607 aaKnown RBP13.17□□□□□ -0.3
MACF1-235ENST00000641104 ABCB4P21439 1286 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 SLC12A2P55011 1212 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 SPOUT1Q5T280 376 aaKnown RBP13.17□□□□□ -0.3
MACF1-235ENST00000641104 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
MACF1-235ENST00000641104 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
MACF1-235ENST00000641104 DMP1Q13316 513 aaPredicted RBP13.16□□□□□ -0.3
MACF1-235ENST00000641104 FAM26FQ5R3K3 315 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 ARHGAP24Q8N264 748 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 GSDMBQ8TAX9 411 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 NRBP2Q9NSY0 501 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 WDR70Q9NW82 654 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 HYOU1Q9Y4L1 999 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 ATP10DQ9P241 1426 aa13.16□□□□□ -0.3
MACF1-235ENST00000641104 KRT71Q3SY84 523 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms