RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 COPB2P35606 906 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 SNRNP48Q6IEG0 339 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 PRPF38AQ8NAV1 312 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 KIFC2Q96AC6 838 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 FEM1BQ9UK73 627 aa17.08■□□□□ 0.32
HNRNPU-229ENST00000640440 PFASO15067 1338 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 RANBP6O60518 1105 aaKnown RBP17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 NMT2O60551 498 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 FGAP02671 866 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 HSPD1P10809 573 aaKnown RBP17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 KCTD2Q14681 263 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 C7orf61Q8IZ16 206 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 MAML3Q96JK9 1138 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
HNRNPU-229ENST00000640440 ZMYM6O95789 1325 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 ORC4O43929 436 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 MSCO60682 206 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 ZBED4O75132 1171 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 BMP3P12645 472 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 SDSP20132 328 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 IL17RBQ9NRM6 502 aa17.06■□□□□ 0.32
HNRNPU-229ENST00000640440 SLC1A4P43007 532 aa17.05■□□□□ 0.32
HNRNPU-229ENST00000640440 HAND2P61296 217 aa17.05■□□□□ 0.32
HNRNPU-229ENST00000640440 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
HNRNPU-229ENST00000640440 PRAMEF19Q5SWL8 479 aa17.05■□□□□ 0.32
HNRNPU-229ENST00000640440 SLC38A10Q9HBR0 1119 aa17.05■□□□□ 0.32
HNRNPU-229ENST00000640440 RAVER2Q9HCJ3 691 aaKnown RBP17.05■□□□□ 0.32
HNRNPU-229ENST00000640440 RIPK3Q9Y572 518 aa17.05■□□□□ 0.32
HNRNPU-229ENST00000640440 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 FGRP09769 529 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 COL6A1P12109 1028 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 MCCP23508 829 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 STAT2P52630 851 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 IKQ13123 557 aaPredicted RBP17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 ZNF792Q3KQV3 632 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 ANO1Q5XXA6 986 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 RASGRP2Q7LDG7 609 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 MTMR7Q9Y216 660 aa17.04■□□□□ 0.32
HNRNPU-229ENST00000640440 ATP2A1O14983 1001 aa17.03■□□□□ 0.32
HNRNPU-229ENST00000640440 SEPT4O43236 478 aa17.03■□□□□ 0.32
HNRNPU-229ENST00000640440 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
HNRNPU-229ENST00000640440 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
HNRNPU-229ENST00000640440 GMCL1Q96IK5 515 aa17.03■□□□□ 0.32
HNRNPU-229ENST00000640440 ZMYND8Q9ULU4 1186 aaPredicted RBP17.03■□□□□ 0.32
HNRNPU-229ENST00000640440 MYH6P13533 1939 aa17.03■□□□□ 0.32
HNRNPU-229ENST00000640440 LAMA3Q16787 3333 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 FXR1P51114 621 aaKnown RBP eCLIP17.02■□□□□ 0.322e-8■□□□□ 10.3
HNRNPU-229ENST00000640440 KCTD1Q719H9 257 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 CHURC1Q8WUH1 139 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 STAG1Q8WVM7 1258 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 TINF2Q9BSI4 451 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 HOMER2Q9NSB8 354 aa17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.32
HNRNPU-229ENST00000640440 LCTP09848 1927 aa17.02■□□□□ 0.31
HNRNPU-229ENST00000640440 SZT2Q5T011 3432 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 DNM1LO00429 736 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 MYCNP04198 464 aaPredicted RBP17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 PDE4AP27815 886 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 OAZ1P54368 228 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 LRRC26Q2I0M4 334 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 CCDC96Q2M329 555 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 GJC2Q5T442 439 aaPredicted RBP17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 MFSD6Q6ZSS7 791 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 SENP6Q9GZR1 1112 aaPredicted RBP17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 PRO3102Q9H379 93 aa17.01■□□□□ 0.31
HNRNPU-229ENST00000640440 HIP1O00291 1037 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 FDX1P10109 184 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 TAL1P17542 331 aaPredicted RBP17■□□□□ 0.31
HNRNPU-229ENST00000640440 SYN1P17600 705 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 NOVP48745 357 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 RCSD1Q6JBY9 416 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 ARRDC4Q8NCT1 418 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 CHST13Q8NET6 341 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 FBXO40Q9UH90 709 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 NRBP1Q9UHY1 535 aa17■□□□□ 0.31
HNRNPU-229ENST00000640440 NEDD4P46934 1319 aa16.99■□□□□ 0.31
HNRNPU-229ENST00000640440 DNAJC25-GNG10A0A024R161 153 aa16.99■□□□□ 0.31
HNRNPU-229ENST00000640440 KBTBD13C9JR72 458 aa16.99■□□□□ 0.31
HNRNPU-229ENST00000640440 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
HNRNPU-229ENST00000640440 PCP11498 1178 aaKnown RBP16.99■□□□□ 0.31
HNRNPU-229ENST00000640440 SNAP25P60880 206 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms