RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
HNRNPU-221ENST00000639824 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
HNRNPU-221ENST00000639824 FLT1P17948 1338 aa12.86□□□□□ -0.35
HNRNPU-221ENST00000639824 PLIN4Q96Q06 1357 aa12.86□□□□□ -0.35
HNRNPU-221ENST00000639824 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 CCDC194A0A1B0GVG4 234 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 PALM3A6NDB9 673 aaPredicted RBP12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 NPR1P16066 1061 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 CDK8P49336 464 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 PLCD1P51178 756 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 CCZ1BP86790 482 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 CCZ1P86791 482 aaPredicted RBP12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 PTGDRQ13258 359 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 SPECC1Q5M775 1068 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 PIK3AP1Q6ZUJ8 805 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 MAPKAPK5Q8IW41 473 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 DYNLL2Q96FJ2 89 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 EYA3Q99504 573 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 RMND1Q9NWS8 449 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 MAD2L2Q9UI95 211 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 TNNT1P13805 278 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 GNA11P29992 359 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 PDE6BP35913 854 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 GRIN1Q05586 938 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 DDR1Q08345 913 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 ZNF174Q15697 407 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 TXNRD1Q16881 649 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 ISM2Q6H9L7 571 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 DHX58Q96C10 678 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 TMEM47Q9BQJ4 181 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 PCDH10Q9P2E7 1040 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 STX8Q9UNK0 236 aa12.85□□□□□ -0.35
HNRNPU-221ENST00000639824 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 ANKRD31Q8N7Z5 1873 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 VWA3AA6NCI4 1184 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 MYL1P05976 194 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 PARP1P09874 1014 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 PRPHP41219 470 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 NOVP48745 357 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 RHBDL3P58872 404 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 HSP90AA2PQ14568 343 aaPredicted RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 PTPN14Q15678 1187 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 EARS2Q5JPH6 523 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 KRT25Q7Z3Z0 450 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 VSTM4Q8IW00 320 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 PDILTQ8N807 584 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 PAGE5Q96GU1 130 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 POLLQ9UGP5 575 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 SWAP70Q9UH65 585 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 MYH8P13535 1937 aa12.84□□□□□ -0.35
HNRNPU-221ENST00000639824 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 PLSCR1O15162 318 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 SYCP1Q15431 976 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 GRIK5Q16478 980 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 HSD3B7Q9H2F3 369 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 PDCL3Q9H2J4 239 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 MAGEF1Q9HAY2 307 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 FANCLQ9NW38 375 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 SAP30BPQ9UHR5 308 aaKnown RBP12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 NFE2L3Q9Y4A8 694 aa12.83□□□□□ -0.36
HNRNPU-221ENST00000639824 ESYT2A0FGR8 921 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 KLRF2D3W0D1 207 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 M0R2N6 131 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 STXBP3O00186 592 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 FOXN1O15353 648 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 TRIM37O94972 964 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 ZNF18P17022 549 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 BMP6P22004 513 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 MCM7P33993 719 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 DPYDQ12882 1025 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 CEP135Q66GS9 1140 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 DTHD1Q6ZMT9 781 aa12.82□□□□□ -0.36
HNRNPU-221ENST00000639824 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms