RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 LONP1P36776 959 aaKnown RBP16.01■□□□□ 0.15
SCARB2-216ENST00000639300 SFMBT2Q5VUG0 894 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 PDLIM2Q96JY6 352 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 SH2D4AQ9H788 454 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 USP17L3A6NCW0 530 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 USP17L4A6NCW7 530 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 KRT5P13647 590 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 MNAT1P51948 309 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 USP17L1Q7RTZ2 530 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 NCAPD2Q15021 1401 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 MECOMQ03112 1051 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 ARHGAP44Q17R89 818 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 GPR161Q8N6U8 529 aaKnown RBP16.01■□□□□ 0.15
SCARB2-216ENST00000639300 PCDHA1Q9Y5I3 950 aa16.01■□□□□ 0.15
SCARB2-216ENST00000639300 PRDX5P30044 214 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 ATG9AQ7Z3C6 839 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 CCDC91Q7Z6B0 441 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 LAMC1P11047 1609 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 CALUO43852 315 aaPredicted RBP16■□□□□ 0.15
SCARB2-216ENST00000639300 TUBGCP2Q9BSJ2 902 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 MICALL1Q8N3F8 863 aa16■□□□□ 0.15
SCARB2-216ENST00000639300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16■□□□□ 0.15
SCARB2-216ENST00000639300 ENC1O14682 589 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 APBA3O96018 575 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 CPLX4Q7Z7G2 160 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 ARFGAP2Q8N6H7 521 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 NEDD4P46934 1319 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 B4DLN1 442 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 PPIP5K2O43314 1243 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 CYP2D6P10635 497 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 CDC27P30260 824 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 CDC25BP30305 580 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 SLC16A2P36021 539 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 RBL2Q08999 1139 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 PPP1R7Q15435 360 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 FAM26FQ5R3K3 315 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 FNBP1Q96RU3 617 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 SRPRBQ9Y5M8 271 aaKnown RBP15.99■□□□□ 0.15
SCARB2-216ENST00000639300 LMTK2Q8IWU2 1503 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 XDHP47989 1333 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 PRKG1Q13976 671 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 DLGAP5Q15398 846 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 CERKLQ49MI3 558 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-216ENST00000639300 MB21D2Q8IYB1 491 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-216ENST00000639300 COA7Q96BR5 231 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 LSM14BQ9BX40 385 aaKnown RBP15.99■□□□□ 0.15
SCARB2-216ENST00000639300 CPVLQ9H3G5 476 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 LRRC41Q15345 812 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 SLC35F6Q8N357 371 aa15.99■□□□□ 0.15
SCARB2-216ENST00000639300 ENOX1Q8TC92 643 aaKnown RBP15.99■□□□□ 0.15
SCARB2-216ENST00000639300 MYO3AQ8NEV4 1616 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 SEMA3EO15041 775 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 BUB1O43683 1085 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 RABL6Q3YEC7 729 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-216ENST00000639300 SPICE1Q8N0Z3 855 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 IPO4Q8TEX9 1081 aaKnown RBP15.98■□□□□ 0.15
SCARB2-216ENST00000639300 LEMD3Q9Y2U8 911 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 IKBKGQ9Y6K9 419 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
SCARB2-216ENST00000639300 EFCAB8A8MWE9 144 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 TRAPPC10P48553 1259 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 CALCOCO2Q13137 446 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 RPS6KA1Q15418 735 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 SLFN13Q68D06 897 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 OTUD6BQ8N6M0 293 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 CCDC26Q8TAB7 109 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 TBCKQ8TEA7 893 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 AFAP1L1Q8TED9 768 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 HAUS4Q9H6D7 363 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 CTTNBP2NLQ9P2B4 639 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 ARMCX3Q9UH62 379 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-216ENST00000639300 DDX25Q9UHL0 483 aaKnown RBP15.98■□□□□ 0.15
SCARB2-216ENST00000639300 PCDHA4Q9UN74 947 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 GAS7O60861 476 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 GABPB1Q06547 395 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-216ENST00000639300 FMR1NBQ8N0W7 255 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-216ENST00000639300 PIGSQ96S52 555 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 CCDC77Q9BR77 488 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 ABCA9Q8IUA7 1624 aa15.98■□□□□ 0.15
SCARB2-216ENST00000639300 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
SCARB2-216ENST00000639300 CYP2J2P51589 502 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 SMTNP53814 917 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 ICA1Q05084 483 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 GALNT17Q6IS24 598 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 MTUS1Q9ULD2 1270 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 NRKQ7Z2Y5 1582 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 GOLGA6CA6NDK9 693 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 GOLGA6BA6NDN3 693 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 FLOT1O75955 427 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 GOLGA6DP0CG33 693 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 POLR2FP61218 127 aaKnown RBP15.97■□□□□ 0.15
SCARB2-216ENST00000639300 OXER1Q8TDS5 423 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 GOLGA6AQ9NYA3 693 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 MTRF1LQ9UGC7 380 aaKnown RBP15.97■□□□□ 0.15
SCARB2-216ENST00000639300 SERPINB2P05120 415 aa15.97■□□□□ 0.15
SCARB2-216ENST00000639300 XRCC5P13010 732 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms