RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 DZIP1LQ8IYY4 767 aaKnown RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 CERS5Q8N5B7 392 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 BBC3Q96PG8 261 aaPredicted RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 ANKRD2Q9GZV1 360 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 ASCC2Q9H1I8 757 aaPredicted RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 R4GN57 208 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 TANC1Q9C0D5 1861 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 FBN3Q75N90 2809 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 PARNO95453 639 aaKnown RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 CCT4P50991 539 aaKnown RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 CSRP2Q16527 193 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 MTHFSDQ2M296 383 aaKnown RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 CCDC152Q4G0S7 254 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 LAIR1Q6GTX8 287 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 TTLL7Q6ZT98 887 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 PROSER1Q86XN7 944 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 TMC2Q8TDI7 906 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 FAM151AQ8WW52 585 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 SUSD6Q92537 303 aa4.6□□□□□ -1.67
CCDC7-213ENST00000639290 RNF166Q96A37 237 aaPredicted RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 NOC4LQ9BVI4 516 aaKnown RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 FAM126AQ9BYI3 521 aaPredicted RBP4.6□□□□□ -1.67
CCDC7-213ENST00000639290 WDFY4Q6ZS81 3184 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ZFYVE26Q68DK2 2539 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 TCP10L2B9ZVM9 353 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 STRNO43815 780 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 CTNND1O60716 968 aaKnown RBP4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ADAMTS4O75173 837 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 C1QL1O75973 258 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 HOXD8P13378 290 aaPredicted RBP4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ERVK-9P63128 1117 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ERVK-24P63145 666 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ADAM15Q13444 863 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 CDCA8Q53HL2 280 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 CCSAPQ6IQ19 270 aaPredicted RBP4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ANKRD18AQ8IVF6 992 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 KREMEN2Q8NCW0 462 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 NELL1Q92832 810 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 MAP4K1Q92918 833 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 CDC5LQ99459 802 aaKnown RBP4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ZBTB3Q9H5J0 574 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 FLRT1Q9NZU1 646 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 SMG5Q9UPR3 1016 aaKnown RBP4.59□□□□□ -1.67
CCDC7-213ENST00000639290 ZHX2Q9Y6X8 837 aa4.59□□□□□ -1.67
CCDC7-213ENST00000639290 LINC01553A4QN01 128 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 CAPN9O14815 690 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 ARHGEF15O94989 841 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 WISP1O95388 367 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 CYP2C18P33260 490 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 IL13P35225 146 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 KCNJ6P48051 423 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 RBM5P52756 815 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC7-213ENST00000639290 ZBTB33Q86T24 672 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 ABRAQ8N0Z2 381 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 IL17REQ8NFR9 667 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 SIL1Q9H173 461 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 BCAS3Q9H6U6 928 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 TDRD3Q9H7E2 651 aaKnown RBP4.58□□□□□ -1.68
CCDC7-213ENST00000639290 C1orf115Q9H7X2 142 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 CD209Q9NNX6 404 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 RABGAP1Q9Y3P9 1069 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 RWDD3Q9Y3V2 267 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 MAST3O60307 1309 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 MAFO75444 373 aaPredicted RBP4.58□□□□□ -1.68
CCDC7-213ENST00000639290 ZMYND10O75800 440 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 RB1P06400 928 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 PIP4K2AP48426 406 aaPredicted RBP4.58□□□□□ -1.68
CCDC7-213ENST00000639290 TRIM28Q13263 835 aaKnown RBP4.58□□□□□ -1.68
CCDC7-213ENST00000639290 HHIPL2Q6UWX4 724 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 ZNF687Q8N1G0 1237 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 PNISRQ8TF01 805 aaKnown RBP4.58□□□□□ -1.68
CCDC7-213ENST00000639290 RUNDC1Q96C34 613 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 NEK1Q96PY6 1258 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 PPP1R12CQ9BZL4 782 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 CWC22Q9HCG8 908 aaKnown RBP4.58□□□□□ -1.68
CCDC7-213ENST00000639290 MSRB2Q9Y3D2 182 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 SALL3Q9BXA9 1300 aa4.58□□□□□ -1.68
CCDC7-213ENST00000639290 C2orf72A6NCS6 295 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 CAPNS1P04632 268 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 RETP07949 1114 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 AKR1A1P14550 325 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 IRX3P78415 501 aaPredicted RBP4.57□□□□□ -1.68
CCDC7-213ENST00000639290 COL28A1Q2UY09 1125 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 FAM47AQ5JRC9 791 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 LBX2Q6XYB7 198 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 ZDHHC14Q8IZN3 488 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 MSL3Q8N5Y2 521 aaKnown RBP4.57□□□□□ -1.68
CCDC7-213ENST00000639290 EFHBQ8N7U6 833 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 AGBL1Q96MI9 1066 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 UPF3AQ9H1J1 476 aaKnown RBP4.57□□□□□ -1.68
CCDC7-213ENST00000639290 SUGT1Q9Y2Z0 365 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 IVNS1ABPQ9Y6Y0 642 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 CLSPNQ9HAW4 1339 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 TSC2P49815 1807 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 PHF20L1A8MW92 1017 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 TREHO43280 583 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 KCNK5O95279 499 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 NPR3P17342 541 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 TTLL4Q14679 1199 aa4.57□□□□□ -1.68
CCDC7-213ENST00000639290 LRRFIP1Q32MZ4 808 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms