RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 ACTN1P12814 892 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 IFNA8P32881 189 aa16.48■□□□□ 0.23
UBE3A-227ENST00000638011 TMED10P49755 219 aaKnown RBP16.48■□□□□ 0.23
UBE3A-227ENST00000638011 HNRNPRO43390 633 aaKnown RBP16.48■□□□□ 0.23
UBE3A-227ENST00000638011 TRMT112Q9UI30 125 aaKnown RBP16.48■□□□□ 0.23
UBE3A-227ENST00000638011 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
UBE3A-227ENST00000638011 KIF9Q9HAQ2 790 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 IFT122Q9HBG6 1241 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 HADHQ16836 314 aaKnown RBP16.47■□□□□ 0.23
UBE3A-227ENST00000638011 FAM133BQ5BKY9 247 aaKnown RBP16.47■□□□□ 0.23
UBE3A-227ENST00000638011 TMEM132EQ6IEE7 984 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
UBE3A-227ENST00000638011 KIF2CQ99661 725 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 KCNK3O14649 394 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 MTX1Q13505 466 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 HELLSQ9NRZ9 838 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 RAB20Q9NX57 234 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 MAP3K2Q9Y2U5 619 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 H0Y626 953 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 TRIM16O95361 564 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 HOOK2Q96ED9 719 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 PPP2R2CQ9Y2T4 447 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 EEF1GP26641 437 aaKnown RBP16.47■□□□□ 0.23
UBE3A-227ENST00000638011 ARHGAP44Q17R89 818 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 ANO5Q75V66 913 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 MTBPQ96DY7 904 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 F8W8V4 182 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 DDX54Q8TDD1 881 aaKnown RBP16.47■□□□□ 0.23
UBE3A-227ENST00000638011 NR1D1P20393 614 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 TRPC1P48995 793 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
UBE3A-227ENST00000638011 ANGEL1Q9UNK9 670 aaKnown RBP16.47■□□□□ 0.23
UBE3A-227ENST00000638011 ABCD1P33897 745 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 GTPBP10A4D1E9 387 aaKnown RBP16.46■□□□□ 0.23
UBE3A-227ENST00000638011 S100BP04271 92 aaPredicted RBP16.46■□□□□ 0.23
UBE3A-227ENST00000638011 ESYT2A0FGR8 921 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 GLE1Q53GS7 698 aaKnown RBP16.46■□□□□ 0.23
UBE3A-227ENST00000638011 MAML3Q96JK9 1138 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 SLC30A9Q6PML9 568 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 DPH6Q7L8W6 267 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 SNX29Q8TEQ0 813 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 NELFBQ8WX92 580 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 RNF34Q969K3 372 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 CDV3Q9UKY7 258 aaKnown RBP16.46■□□□□ 0.23
UBE3A-227ENST00000638011 UBE4BO95155 1302 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 H7C1D1 291 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 KIAA1468Q9P260 1216 aa16.46■□□□□ 0.23
UBE3A-227ENST00000638011 CCPG1Q9ULG6 757 aa16.46■□□□□ 0.22
UBE3A-227ENST00000638011 SNX5Q9Y5X3 404 aa16.46■□□□□ 0.22
UBE3A-227ENST00000638011 H0YCG3 227 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 DDX42Q86XP3 938 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBE3A-227ENST00000638011 FMO2Q99518 471 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 TTC1Q99614 292 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 TRIM8Q9BZR9 551 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 FBXO18Q8NFZ0 1043 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 TADA3O75528 432 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
UBE3A-227ENST00000638011 CUL3Q13618 768 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 FSCBQ5H9T9 825 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 FBXL13Q8NEE6 735 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 TSC22D4Q9Y3Q8 395 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 RPRD2Q5VT52 1461 aaKnown RBP16.45■□□□□ 0.22
UBE3A-227ENST00000638011 STXBP3O00186 592 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 GRM8O00222 908 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 DAB1O75553 588 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 MPP6Q9NZW5 540 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 TRPA1O75762 1119 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 BIRC2Q13490 618 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 KLC3Q6P597 504 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
UBE3A-227ENST00000638011 KRT81Q14533 505 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 KRT39Q6A163 491 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 NCAPH2Q6IBW4 605 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 PBKQ96KB5 322 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 USP26Q9BXU7 913 aa16.45■□□□□ 0.22
UBE3A-227ENST00000638011 MYO1CO00159 1063 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 DEFA1P59665 94 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 DEFA3P59666 94 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 RNASE9P60153 205 aaKnown RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 AP1B1Q10567 949 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 RCN2Q14257 317 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 ENOX1Q8TC92 643 aaKnown RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 PRDM11Q9NQV5 511 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 CACNA1FO60840 1977 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 MRRFQ96E11 262 aaKnown RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 PPME1Q9Y570 386 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 CCNT1O60563 726 aaKnown RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 E2F5Q15329 346 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 HDAC11Q96DB2 347 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 ESRRAP11474 423 aaPredicted RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 GRAMD1BQ3KR37 738 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 SLF1Q9BQI6 1058 aa16.44■□□□□ 0.22
UBE3A-227ENST00000638011 CHCHD3Q9NX63 227 aaKnown RBP16.44■□□□□ 0.22
UBE3A-227ENST00000638011 PRPSAP1Q14558 356 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms