RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 MYL10Q9BUA6 226 aa26.09■■□□□ 1.77
CHRNA7-231ENST00000637786 GPCPD1Q9NPB8 672 aa26.09■■□□□ 1.77
CHRNA7-231ENST00000637786 GNAQP50148 359 aa26.08■■□□□ 1.77
CHRNA7-231ENST00000637786 IKQ13123 557 aaPredicted RBP26.08■■□□□ 1.77
CHRNA7-231ENST00000637786 CHMP4CQ96CF2 233 aa26.08■■□□□ 1.77
CHRNA7-231ENST00000637786 GOLGA8BA8MQT2 603 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 KLRF2D3W0D1 207 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 ST18O60284 1047 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 GOLGA8HP0CJ92 632 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 TTBK2Q6IQ55 1244 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 STAG2Q8N3U4 1231 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 LZTS2Q9BRK4 669 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 RBM28Q9NW13 759 aaKnown RBP26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 RABGAP1Q9Y3P9 1069 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 PCNTO95613 3336 aa26.07■■□□□ 1.76
CHRNA7-231ENST00000637786 SMARCA1P28370 1054 aa26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 PDIA3P30101 505 aaKnown RBP26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 NOM1Q5C9Z4 860 aaKnown RBP26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 SYDE2Q5VT97 1194 aa26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 KIFC2Q96AC6 838 aa26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 ATG4CQ96DT6 458 aa26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 PRR12Q9ULL5 1215 aa26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 HPS5Q9UPZ3 1129 aa26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 COL11A1P12107 1806 aaPredicted RBP26.06■■□□□ 1.76
CHRNA7-231ENST00000637786 CCDC196A0A1B0GTZ2 297 aa26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 GOLGA8AA7E2F4 631 aa26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 VWA5AO00534 786 aa26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 RXRAP19793 462 aa26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 METAP2P50579 478 aaKnown RBP eCLIP26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 RTN1Q16799 776 aa26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 C17orf99Q6UX52 265 aa26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 MORF4L1Q9UBU8 362 aa26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 NAP1L2Q9ULW6 460 aaPredicted RBP26.05■■□□□ 1.76
CHRNA7-231ENST00000637786 TBC1D8O95759 1140 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 BCRP11274 1271 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 SLC16A2P36021 539 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 FAM110CQ1W6H9 321 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 POTEEQ6S8J3 1075 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 SLC38A10Q9HBR0 1119 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 RBPJLQ9UBG7 517 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 TPCN1Q9ULQ1 816 aa26.04■■□□□ 1.76
CHRNA7-231ENST00000637786 ZBED4O75132 1171 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 TMTC3Q6ZXV5 915 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 RAB11FIP4Q86YS3 637 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 CCDC144CPQ8IYA2 1237 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 REPS2Q8NFH8 660 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 SPZ1Q9BXG8 430 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 UBA5Q9GZZ9 404 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 R3HDMLQ9H3Y0 253 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 RIOX1Q9H6W3 641 aa26.03■■□□□ 1.76
CHRNA7-231ENST00000637786 ATP2A1O14983 1001 aa26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 OAZ1P54368 228 aa26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 ADGRF4Q8IZF3 695 aa26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 RANBP17Q9H2T7 1088 aaKnown RBP26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 FAM217BQ9NTX9 383 aaPredicted RBP26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 CPA4Q9UI42 421 aa26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 LIMCH1Q9UPQ0 1083 aa26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 BAZ2BQ9UIF8 2168 aaKnown RBP26.02■■□□□ 1.76
CHRNA7-231ENST00000637786 CNMDO75829 334 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 MCM2P49736 904 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 SAMD1Q6SPF0 538 aaPredicted RBP26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 ANKRD13CQ8N6S4 541 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 GPRC5AQ8NFJ5 357 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 MTMR8Q96EF0 704 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 LARP6Q9BRS8 491 aaKnown RBP26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 TXNRD2Q9NNW7 524 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 BTBD7Q9P203 1132 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 PNMA2Q9UL42 364 aa26.01■■□□□ 1.75
CHRNA7-231ENST00000637786 MYH6P13533 1939 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 PFKFB2O60825 505 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 CDC27P30260 824 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 ERVK-9P63128 1117 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 ERVK-24P63145 666 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 PAGR1Q9BTK6 254 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 CPVLQ9H3G5 476 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 JMJD4Q9H9V9 463 aa26■■□□□ 1.75
CHRNA7-231ENST00000637786 ZNF214Q9UL59 606 aaPredicted RBP26■■□□□ 1.75
CHRNA7-231ENST00000637786 CTDP1Q9Y5B0 961 aaPredicted RBP26■■□□□ 1.75
CHRNA7-231ENST00000637786 GPR25O00155 361 aa25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 CYTH3O43739 400 aa25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 PLEKHA8P1O95397 391 aa25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 TMEM132BQ14DG7 1078 aa25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 SLC35G1Q2M3R5 365 aa25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 NBPF11Q86T75 865 aa25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 SRBD1Q8N5C6 995 aaKnown RBP25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 ZSCAN31Q96LW9 406 aaPredicted RBP25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 SLKQ9H2G2 1235 aaPredicted RBP25.99■■□□□ 1.75
CHRNA7-231ENST00000637786 DHX16O60231 1041 aaKnown RBP25.98■■□□□ 1.75
CHRNA7-231ENST00000637786 CCNA1P78396 465 aa25.98■■□□□ 1.75
CHRNA7-231ENST00000637786 ME3Q16798 604 aa25.98■■□□□ 1.75
CHRNA7-231ENST00000637786 TEX13BQ9BXU2 312 aa25.98■■□□□ 1.75
CHRNA7-231ENST00000637786 SPATC1LQ9H0A9 340 aa25.98■■□□□ 1.75
CHRNA7-231ENST00000637786 SH2B1Q9NRF2 756 aaPredicted RBP25.98■■□□□ 1.75
CHRNA7-231ENST00000637786 COPB2P35606 906 aa25.97■■□□□ 1.75
CHRNA7-231ENST00000637786 ADD1P35611 737 aaKnown RBP25.97■■□□□ 1.75
CHRNA7-231ENST00000637786 CCT2P78371 535 aaKnown RBP25.97■■□□□ 1.75
CHRNA7-231ENST00000637786 FUT2Q10981 343 aa25.97■■□□□ 1.75
CHRNA7-231ENST00000637786 NOL8Q76FK4 1167 aaKnown RBP25.97■■□□□ 1.75
CHRNA7-231ENST00000637786 ZNF536O15090 1300 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 ZBTB5O15062 677 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms