RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 PSMB7Q99436 277 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 GTPBP6O43824 516 aaPredicted RBP22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 AARSP49588 968 aaKnown RBP eCLIP22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 SPAG1Q07617 926 aa22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 ZSCAN10Q96SZ4 725 aaPredicted RBP22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 KAT14Q9H8E8 782 aa22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 CDHR2Q9BYE9 1310 aa22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 GTF2A1P52655 376 aaPredicted RBP22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 TSR1Q2NL82 804 aaKnown RBP22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 TNFRSF25Q93038 417 aa22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 RNF41Q9H4P4 317 aaPredicted RBP22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 TNS3Q68CZ2 1445 aa22.67■■□□□ 1.22
CACNA1A-243ENST00000637616 PRPF3O43395 683 aaKnown RBP22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 RASSF8Q8NHQ8 419 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 PDE8AO60658 829 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 TUBBP07437 444 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 CCT5P48643 541 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 NLRP5P59047 1200 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 TRIM14Q14142 442 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 CATIPQ7Z7H3 387 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 RRP36Q96EU6 259 aaKnown RBP22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 BRMS1Q9HCU9 246 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 SMARCAL1Q9NZC9 954 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 JRKLQ9Y4A0 524 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 COL18A1P39060 1754 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 NKRFO15226 690 aaKnown RBP eCLIP22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 SLC4A8Q2Y0W8 1093 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 CTCFLQ8NI51 663 aaPredicted RBP22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 RASGRP4Q8TDF6 673 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 PIGBQ92521 554 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 VIPAS39Q9H9C1 493 aa22.66■■□□□ 1.22
CACNA1A-243ENST00000637616 IDEP14735 1019 aa22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 ICE2Q659A1 982 aa22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 KRT26Q7Z3Y9 468 aa22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 MICALL1Q8N3F8 863 aa22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 SRBD1Q8N5C6 995 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 PCMTD1Q96MG8 357 aaPredicted RBP22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 POLD4Q9HCU8 107 aa22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 EIF5P55010 431 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 DYNLL1P63167 89 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 SLC7A5Q01650 507 aa22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 MAP9Q49MG5 647 aa22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 PAPD7Q5XG87 772 aaKnown RBP22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 CCNI2Q6ZMN8 369 aaPredicted RBP22.65■■□□□ 1.22
CACNA1A-243ENST00000637616 STAT6P42226 847 aa22.64■■□□□ 1.22
CACNA1A-243ENST00000637616 TRIM47Q96LD4 638 aa22.64■■□□□ 1.22
CACNA1A-243ENST00000637616 STARD3NLO95772 234 aa22.64■■□□□ 1.21
CACNA1A-243ENST00000637616 IL2RBP14784 551 aa22.64■■□□□ 1.21
CACNA1A-243ENST00000637616 TRIM21P19474 475 aaKnown RBP22.64■■□□□ 1.21
CACNA1A-243ENST00000637616 DNAJC7Q99615 494 aa22.64■■□□□ 1.21
CACNA1A-243ENST00000637616 GNAT2P19087 354 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 TROAPQ12815 778 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 NHEJ1Q9H9Q4 299 aaPredicted RBP22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 EHD2Q9NZN4 543 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 ZBTB1Q9Y2K1 713 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 LGALS16A8MUM7 142 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 PLEKP08567 350 aaPredicted RBP22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 SND1Q7KZF4 910 aaKnown RBP eCLIP22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 PPM1EQ8WY54 764 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 GOLGA6CA6NDK9 693 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 GOLGA6BA6NDN3 693 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 GOLGA6DP0CG33 693 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 CXCR5P32302 372 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 LIG3P49916 1009 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 FAM47AQ5JRC9 791 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 ALS2Q96Q42 1657 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 GOLGA6AQ9NYA3 693 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 CAPN11Q9UMQ6 739 aa22.63■■□□□ 1.21
CACNA1A-243ENST00000637616 RTL9Q8NET4 1388 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 H7C1D1 291 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 KRT86O43790 486 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 ADSSL1Q8N142 457 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 FAM76AQ8TAV0 307 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 ZNF507Q8TCN5 953 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 DMGDHQ9UI17 866 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 MROH5Q6ZUA9 1318 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 PNPLA7Q6ZV29 1317 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 RASSF10A6NK89 507 aa22.62■■□□□ 1.21
CACNA1A-243ENST00000637616 BMP15O95972 392 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 NKX1-1Q15270 411 aaPredicted RBP22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 LRRC1Q9BTT6 524 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 KAT6BQ8WYB5 2073 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 BCL9LQ86UU0 1499 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 CHD4Q14839 1912 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 EXOC5O00471 708 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 ERCC3P19447 782 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 IRAK1P51617 712 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 MAGEB6P1A0A0J9YX57 407 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 GPKOWQ92917 476 aaPredicted RBP eCLIP22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 LRWD1Q9UFC0 647 aa22.61■■□□□ 1.21
CACNA1A-243ENST00000637616 KRT83P78385 493 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 TMTC3Q6ZXV5 915 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 MYH6P13533 1939 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 SLC4A9Q96Q91 983 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 MLXIPQ9HAP2 919 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 RMND1Q9NWS8 449 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 MTMR7Q9Y216 660 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 SAMM50Q9Y512 469 aa22.6■■□□□ 1.21
CACNA1A-243ENST00000637616 TBC1D8BQ0IIM8 1120 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms