RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PHF24Q9UPV7 400 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 ROBO3Q96MS0 1386 aa14.99□□□□□ -0.01
CTSD-208ENST00000636843 MINDY4BA8MYZ0 360 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 F5H6K3 240 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 KLRC3Q07444 240 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 LRRFIP1Q32MZ4 808 aaKnown RBP14.98□□□□□ -0.01
CTSD-208ENST00000636843 TRIM60Q495X7 471 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 RNF180Q86T96 592 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 PRPF38AQ8NAV1 312 aaKnown RBP14.98□□□□□ -0.01
CTSD-208ENST00000636843 FERMT2Q96AC1 680 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 PRDM5Q9NQX1 630 aaPredicted RBP14.98□□□□□ -0.01
CTSD-208ENST00000636843 PDLIM7Q9NR12 457 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 PARP14Q460N5 1801 aa14.98□□□□□ -0.01
CTSD-208ENST00000636843 IGKV6D-41A0A0C4DH26 115 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 ATP2A1O14983 1001 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 GPAA1O43292 621 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 NDUFB10O96000 172 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 ZNF865P0CJ78 1059 aaPredicted RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 AKR1A1P14550 325 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 BMP2KLQ5H9B9 411 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 ZNF444Q8N0Y2 327 aaPredicted RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 NUP88Q99567 741 aaPredicted RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 CLIP2Q9UDT6 1046 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 DAXXQ9UER7 740 aaPredicted RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 SYNPO2Q9UMS6 1093 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 CNPY2Q9Y2B0 182 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 ZNFX1Q9P2E3 1918 aaKnown RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 ZBED4O75132 1171 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 SEC24BO95487 1268 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 TAL1P17542 331 aaPredicted RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 TDO2P48775 406 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 SNRNP48Q6IEG0 339 aaKnown RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 MKL1Q969V6 931 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 EPB41L4AQ9HCS5 686 aaPredicted RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 CTDP1Q9Y5B0 961 aaPredicted RBP14.97□□□□□ -0.01
CTSD-208ENST00000636843 TACC3Q9Y6A5 838 aa14.97□□□□□ -0.01
CTSD-208ENST00000636843 PATL2C9JE40 543 aaKnown RBP14.96□□□□□ -0.02
CTSD-208ENST00000636843 PGK1P00558 417 aa14.96□□□□□ -0.02
CTSD-208ENST00000636843 TLE2Q04725 743 aa14.96□□□□□ -0.02
CTSD-208ENST00000636843 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.02
CTSD-208ENST00000636843 BADQ92934 168 aa14.96□□□□□ -0.02
CTSD-208ENST00000636843 TSEN34Q9BSV6 310 aaKnown RBP14.96□□□□□ -0.02
CTSD-208ENST00000636843 FEM1BQ9UK73 627 aa14.96□□□□□ -0.02
CTSD-208ENST00000636843 SYNGAP1Q96PV0 1343 aa14.96□□□□□ -0.02
CTSD-208ENST00000636843 SMCHD1A6NHR9 2005 aa14.96□□□□□ -0.02
CTSD-208ENST00000636843 COL11A1P12107 1806 aaPredicted RBP14.95□□□□□ -0.02
CTSD-208ENST00000636843 GREB1LQ9C091 1923 aaPredicted RBP14.95□□□□□ -0.02
CTSD-208ENST00000636843 DNAJC25-GNG10A0A024R161 153 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 TRIM43BA6NCK2 446 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 ERC2O15083 957 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 EIF5BO60841 1220 aaKnown RBP14.95□□□□□ -0.02
CTSD-208ENST00000636843 APPP05067 770 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 SHHQ15465 462 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 TSHZ3Q63HK5 1081 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 MAMDC4Q6UXC1 1216 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 SH3RF1Q7Z6J0 888 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 ZNF467Q7Z7K2 595 aaPredicted RBP14.95□□□□□ -0.02
CTSD-208ENST00000636843 TRIM43Q96BQ3 446 aaPredicted RBP14.95□□□□□ -0.02
CTSD-208ENST00000636843 TBC1D32Q96NH3 1257 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 NACAP1Q9BZK3 213 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 MTMR4Q9NYA4 1195 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 FBXO40Q9UH90 709 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 FAM184BQ9ULE4 1060 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 TTC41PQ6P2S7 1318 aa14.95□□□□□ -0.02
CTSD-208ENST00000636843 A0A0C4DFX4 3053 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 A0A1W2PQ45 241 aaPredicted RBP14.94□□□□□ -0.02
CTSD-208ENST00000636843 A0A1W2PQY0 241 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 M0R2C6 588 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 TTLL1O95922 423 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 CLTBP09497 229 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 FDX1P10109 184 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 OAZ1P54368 228 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 ZNF697Q5TEC3 545 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 IFNL3Q8IZI9 196 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 CPXCR1Q8N123 301 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 GMCL1P1Q8NEA9 526 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 CEP95Q96GE4 821 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 SLC38A10Q9HBR0 1119 aa14.94□□□□□ -0.02
CTSD-208ENST00000636843 ADAMTS4O75173 837 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 PRDM1O75626 825 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 SNAI1O95863 264 aaPredicted RBP14.93□□□□□ -0.02
CTSD-208ENST00000636843 SLC3A2P08195 630 aaKnown RBP14.93□□□□□ -0.02
CTSD-208ENST00000636843 PDE4BQ07343 736 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 C9orf50Q5SZB4 431 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 CHST13Q8NET6 341 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 NUP133Q8WUM0 1156 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 KIFC2Q96AC6 838 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 GUCD1Q96NT3 240 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 RAVER2Q9HCJ3 691 aaKnown RBP14.93□□□□□ -0.02
CTSD-208ENST00000636843 LTBP2Q14767 1821 aa14.93□□□□□ -0.02
CTSD-208ENST00000636843 MOXD2PA6NHM9 499 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 KIAA0355O15063 1070 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 DUSP11O75319 330 aaKnown RBP14.92□□□□□ -0.02
CTSD-208ENST00000636843 SMAD3P84022 425 aaKnown RBP14.92□□□□□ -0.02
CTSD-208ENST00000636843 KLHDC9Q8NEP7 349 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 NEDD1Q8NHV4 660 aa14.92□□□□□ -0.02
CTSD-208ENST00000636843 TOX2Q96NM4 488 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms