RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 MYOGP15173 224 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 EVX2Q03828 476 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 TMEM179Q6ZVK1 233 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 OTOP2Q7RTS6 562 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 KHSRPQ92945 711 aaKnown RBP eCLIP22.08■■□□□ 1.138e-8■□□□□ 8.3
CLN6-212ENST00000636020 VCPKMTQ9H867 229 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 TMX2Q9Y320 296 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 PCDHA11Q9Y5I1 949 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 MTCH2Q9Y6C9 303 aa22.08■■□□□ 1.13
CLN6-212ENST00000636020 PARP14Q460N5 1801 aa22.08■■□□□ 1.12
CLN6-212ENST00000636020 WDR46O15213 610 aaKnown RBP22.07■■□□□ 1.12
CLN6-212ENST00000636020 C6orf222P0C671 652 aaPredicted RBP22.07■■□□□ 1.12
CLN6-212ENST00000636020 STAT3P40763 770 aa22.07■■□□□ 1.12
CLN6-212ENST00000636020 COG5Q9UP83 839 aa22.07■■□□□ 1.12
CLN6-212ENST00000636020 COL11A1P12107 1806 aaPredicted RBP22.07■■□□□ 1.12
CLN6-212ENST00000636020 MAMDC4Q6UXC1 1216 aa22.06■■□□□ 1.12
CLN6-212ENST00000636020 RIOK1Q9BRS2 568 aaKnown RBP22.06■■□□□ 1.12
CLN6-212ENST00000636020 UPF3AQ9H1J1 476 aaKnown RBP22.06■■□□□ 1.12
CLN6-212ENST00000636020 FBXO28Q9NVF7 368 aa22.06■■□□□ 1.12
CLN6-212ENST00000636020 ZHX1Q9UKY1 873 aaPredicted RBP22.06■■□□□ 1.12
CLN6-212ENST00000636020 ZNF214Q9UL59 606 aaPredicted RBP22.06■■□□□ 1.12
CLN6-212ENST00000636020 FAM86C2PA6NEL3 165 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 ADCY6O43306 1168 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 COPB2P35606 906 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 GJA9P57773 515 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 CLEC10AQ8IUN9 316 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 ARHGEF10LQ9HCE6 1279 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 SLC4A7Q9Y6M7 1214 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 UMODL1Q5DID0 1318 aa22.05■■□□□ 1.12
CLN6-212ENST00000636020 RFXAPO00287 272 aa22.04■■□□□ 1.12
CLN6-212ENST00000636020 VWA5AO00534 786 aa22.04■■□□□ 1.12
CLN6-212ENST00000636020 GNASQ5JWF2 1037 aa22.04■■□□□ 1.12
CLN6-212ENST00000636020 REPS2Q8NFH8 660 aa22.04■■□□□ 1.12
CLN6-212ENST00000636020 HIPK3Q9H422 1215 aa22.04■■□□□ 1.12
CLN6-212ENST00000636020 SH2D4AQ9H788 454 aa22.04■■□□□ 1.12
CLN6-212ENST00000636020 SPC25Q9HBM1 224 aa22.04■■□□□ 1.12
CLN6-212ENST00000636020 DNAJC25-GNG10A0A024R161 153 aa22.03■■□□□ 1.12
CLN6-212ENST00000636020 GTPBP6O43824 516 aaPredicted RBP22.03■■□□□ 1.12
CLN6-212ENST00000636020 GNAI2P04899 355 aa22.03■■□□□ 1.12
CLN6-212ENST00000636020 ACVR2BQ13705 512 aa22.03■■□□□ 1.12
CLN6-212ENST00000636020 TMED8Q6PL24 325 aaPredicted RBP22.03■■□□□ 1.12
CLN6-212ENST00000636020 SLC43A3Q8NBI5 491 aa22.03■■□□□ 1.12
CLN6-212ENST00000636020 MCM9Q9NXL9 1143 aa22.03■■□□□ 1.12
CLN6-212ENST00000636020 DBNLQ9UJU6 430 aaKnown RBP22.03■■□□□ 1.12
CLN6-212ENST00000636020 PI4K2BG5E9Z4 385 aa22.02■■□□□ 1.12
CLN6-212ENST00000636020 CTAGE5O15320 804 aa22.02■■□□□ 1.12
CLN6-212ENST00000636020 ICA1Q05084 483 aa22.02■■□□□ 1.12
CLN6-212ENST00000636020 ANTXR1Q9H6X2 564 aa22.02■■□□□ 1.12
CLN6-212ENST00000636020 PPP1R9AQ9ULJ8 1098 aa22.02■■□□□ 1.12
CLN6-212ENST00000636020 LRRC37A2A6NM11 1700 aa22.02■■□□□ 1.12
CLN6-212ENST00000636020 CCL23P55773 120 aa22.01■■□□□ 1.11
CLN6-212ENST00000636020 NKX3-2P78367 333 aa22.01■■□□□ 1.11
CLN6-212ENST00000636020 CCDC144BQ3MJ40 725 aa22.01■■□□□ 1.11
CLN6-212ENST00000636020 ZNF467Q7Z7K2 595 aaPredicted RBP22.01■■□□□ 1.11
CLN6-212ENST00000636020 VWCEQ96DN2 955 aa22.01■■□□□ 1.11
CLN6-212ENST00000636020 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.01■■□□□ 1.11
CLN6-212ENST00000636020 TLR7Q9NYK1 1049 aaKnown RBP22.01■■□□□ 1.11
CLN6-212ENST00000636020 AKR1B1P15121 316 aa22■■□□□ 1.11
CLN6-212ENST00000636020 ATP2A2P16615 1042 aaKnown RBP22■■□□□ 1.11
CLN6-212ENST00000636020 KRT40Q6A162 431 aa22■■□□□ 1.11
CLN6-212ENST00000636020 RPUSD2Q8IZ73 545 aaKnown RBP22■■□□□ 1.11
CLN6-212ENST00000636020 HLA-CQ95604 372 aa22■■□□□ 1.11
CLN6-212ENST00000636020 DDX11Q96FC9 970 aa22■■□□□ 1.11
CLN6-212ENST00000636020 NOC4LQ9BVI4 516 aaKnown RBP22■■□□□ 1.11
CLN6-212ENST00000636020 WNT8AQ9H1J5 351 aa22■■□□□ 1.11
CLN6-212ENST00000636020 ABHD16BQ9H3Z7 469 aa22■■□□□ 1.11
CLN6-212ENST00000636020 SWAP70Q9UH65 585 aa22■■□□□ 1.11
CLN6-212ENST00000636020 NAV1Q8NEY1 1877 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 WDFY4Q6ZS81 3184 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 MAGEB6P1A0A0J9YX57 407 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 EPOPA6NHQ4 379 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 SMIM22K7EJ46 135 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 ANP32CO43423 234 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 CT47B1P0C2W7 299 aaPredicted RBP21.99■■□□□ 1.11
CLN6-212ENST00000636020 CYP2D6P10635 497 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 TMEM67Q5HYA8 995 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
CLN6-212ENST00000636020 ARHGAP45Q92619 1136 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 DYNLL2Q96FJ2 89 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 CRNKL1Q9BZJ0 848 aaKnown RBP21.99■■□□□ 1.11
CLN6-212ENST00000636020 CD320Q9NPF0 282 aa21.99■■□□□ 1.11
CLN6-212ENST00000636020 ZBBXA8MT70 800 aa21.98■■□□□ 1.11
CLN6-212ENST00000636020 MRE11P49959 708 aa21.98■■□□□ 1.11
CLN6-212ENST00000636020 OS9Q13438 667 aaPredicted RBP21.98■■□□□ 1.11
CLN6-212ENST00000636020 POLA2Q14181 598 aa21.98■■□□□ 1.11
CLN6-212ENST00000636020 CCDC8Q9H0W5 538 aaPredicted RBP21.98■■□□□ 1.11
CLN6-212ENST00000636020 CERS4Q9HA82 394 aa21.98■■□□□ 1.11
CLN6-212ENST00000636020 RIPK3Q9Y572 518 aa21.98■■□□□ 1.11
CLN6-212ENST00000636020 CA3P07451 260 aa21.97■■□□□ 1.11
CLN6-212ENST00000636020 BEX3Q00994 111 aa21.97■■□□□ 1.11
CLN6-212ENST00000636020 CXCL17Q6UXB2 119 aa21.97■■□□□ 1.11
CLN6-212ENST00000636020 SNX27Q96L92 541 aa21.97■■□□□ 1.11
CLN6-212ENST00000636020 FGD4Q96M96 766 aa21.97■■□□□ 1.11
CLN6-212ENST00000636020 TEX13BQ9BXU2 312 aa21.97■■□□□ 1.11
CLN6-212ENST00000636020 DCP1AQ9NPI6 582 aaPredicted RBP21.97■■□□□ 1.11
CLN6-212ENST00000636020 MCM3APO60318 1980 aa21.96■■□□□ 1.11
CLN6-212ENST00000636020 PRR33A8MZF0 331 aa21.96■■□□□ 1.11
CLN6-212ENST00000636020 EEF2P13639 858 aaKnown RBP21.96■■□□□ 1.11
CLN6-212ENST00000636020 ITGA7Q13683 1181 aa21.96■■□□□ 1.11
CLN6-212ENST00000636020 SDR42E1Q8WUS8 393 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms