RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PRKAB2O43741 272 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 DNM2P50570 870 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 FUT2Q10981 343 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 FNBP4Q8N3X1 1017 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 NOC3LQ8WTT2 800 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 ZNF142P52746 1687 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 IRS4O14654 1257 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 PRCPP42785 496 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 ITIH3Q06033 890 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 LCORLQ8N3X6 602 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 CAPZA3Q96KX2 299 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 TSGA10Q9BZW7 698 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 MAGEC2Q9UBF1 373 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 ANAPC4Q9UJX5 808 aa16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 V9GY48 417 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-220ENST00000635988 GOLGA8KD6RF30 607 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 PDE8AO60658 829 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 COBLO75128 1261 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 RASGRF1Q13972 1273 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 ARL6IP4Q66PJ3 421 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 WDR59Q6PJI9 974 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 MMS22LQ6ZRQ5 1243 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 MYH6P13533 1939 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 AGPSO00116 658 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 OPA1O60313 960 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 SRGAP2O75044 1071 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 LONP1P36776 959 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 IRAK1P51617 712 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 IRF2BP1Q8IU81 584 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 ADSSL1Q8N142 457 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 MMGT1Q8N4V1 131 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 GEMIN8Q9NWZ8 242 aaKnown RBP16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 DOCK2Q92608 1830 aa16.59■□□□□ 0.25
CACNA1A-220ENST00000635988 MYL1P05976 194 aa16.58■□□□□ 0.25
CACNA1A-220ENST00000635988 SYNE4Q8N205 404 aa16.58■□□□□ 0.25
CACNA1A-220ENST00000635988 AENQ8WTP8 325 aaKnown RBP16.58■□□□□ 0.25
CACNA1A-220ENST00000635988 MTRQ99707 1265 aa16.58■□□□□ 0.25
CACNA1A-220ENST00000635988 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 STARD3NLO95772 234 aa16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 KCNB1Q14721 858 aa16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 RIN2Q8WYP3 895 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 PURBQ96QR8 312 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 ZSCAN10Q96SZ4 725 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 CAPS2Q9BXY5 557 aa16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 PLEKHA4Q9H4M7 779 aa16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 KAT14Q9H8E8 782 aa16.58■□□□□ 0.24
CACNA1A-220ENST00000635988 ARAP2Q8WZ64 1704 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 PES1O00541 588 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 WNT7AO00755 349 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 PSMA7O14818 248 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 PRDM1O75626 825 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 SRGNP10124 158 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 IDEP14735 1019 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 KIF5AQ12840 1032 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 IFIT1BQ5T764 474 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 CABLES1Q8TDN4 633 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 IQCDQ96DY2 449 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 SOS2Q07890 1332 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 DDAH1O94760 285 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 ERLIN2O94905 339 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 ZBED6P86452 979 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 CDK17Q00537 523 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 ZNF572Q7Z3I7 529 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 TRIM58Q8NG06 486 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 JADE2Q9NQC1 790 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 TRMT112Q9UI30 125 aaKnown RBP16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 GDAQ9Y2T3 454 aa16.57■□□□□ 0.24
CACNA1A-220ENST00000635988 EXOC5O00471 708 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 PCP11498 1178 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 PRLRP16471 622 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 GPTP24298 496 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 STAT6P42226 847 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 NPY5RQ15761 445 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 IQCA1Q86XH1 822 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 EXOC1Q9NV70 894 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 ANKRD65E5RJM6 399 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 ZMYND10O75800 440 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 USP8P40818 1118 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 CCT5P48643 541 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 SWT1Q5T5J6 900 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 SECISBP2LQ93073 1101 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 CEP89Q96ST8 783 aa16.56■□□□□ 0.24
CACNA1A-220ENST00000635988 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 EIF3HO15372 352 aaKnown RBP eCLIP16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 USO1O60763 962 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 MYBL2P10244 700 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 EPB41P11171 864 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 VAV2P52735 878 aa16.55■□□□□ 0.24
CACNA1A-220ENST00000635988 SPA17Q15506 151 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms