RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 GPR142Q7Z601 462 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 SHCBP1Q8NEM2 672 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 NEK1Q96PY6 1258 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 SLC38A10Q9HBR0 1119 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 SENP2Q9HC62 589 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 GABRQQ9UN88 632 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
LINC00339-210ENST00000635675 FRMPD2Q68DX3 1309 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-210ENST00000635675 ERICH2A1L162 156 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 ZBED4O75132 1171 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 ERCC3P19447 782 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 STAT3P40763 770 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 FLT3LGP49771 235 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 EXOSC10Q01780 885 aaKnown RBP11.4□□□□□ -0.58
LINC00339-210ENST00000635675 PLS1Q14651 629 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 WTAPQ15007 396 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 GPATCH4Q5T3I0 446 aaKnown RBP11.4□□□□□ -0.58
LINC00339-210ENST00000635675 PLEKHH3Q7Z736 793 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 RIOX2Q8IUF8 465 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 CCAR1Q8IX12 1150 aaKnown RBP11.4□□□□□ -0.58
LINC00339-210ENST00000635675 ABHD8Q96I13 439 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 TMEM87BQ96K49 555 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 MROH8Q9H579 483 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 LY9Q9HBG7 655 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-210ENST00000635675 PRR12Q9ULL5 1215 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
LINC00339-210ENST00000635675 SNX14Q9Y5W7 946 aa11.4□□□□□ -0.58
LINC00339-210ENST00000635675 WDR19Q8NEZ3 1342 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 SH2B2O14492 632 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-210ENST00000635675 SLC25A27O95847 323 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 GOLGA8HP0CJ92 632 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 SLC16A2P36021 539 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 OAZ1P54368 228 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 TROAPQ12815 778 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-210ENST00000635675 IRF5Q13568 498 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 MORN1Q5T089 497 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 DHX32Q7L7V1 743 aaKnown RBP11.39□□□□□ -0.59
LINC00339-210ENST00000635675 TMTC2Q8N394 836 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 USP6NLQ92738 828 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 TEX13BQ9BXU2 312 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 PLXNB2O15031 1838 aa11.39□□□□□ -0.59
LINC00339-210ENST00000635675 ZNF536O15090 1300 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 SLC15A5A6NIM6 579 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 STRNO43815 780 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 HMGB1P09429 215 aaKnown RBP11.38□□□□□ -0.59
LINC00339-210ENST00000635675 PTPREP23469 700 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 LIFRP42702 1097 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 SYDE2Q5VT97 1194 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 NCAPG2Q86XI2 1143 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 CPXCR1Q8N123 301 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 PXYLP1Q8TE99 480 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
LINC00339-210ENST00000635675 RAVER2Q9HCJ3 691 aaKnown RBP11.38□□□□□ -0.59
LINC00339-210ENST00000635675 RIPK3Q9Y572 518 aa11.38□□□□□ -0.59
LINC00339-210ENST00000635675 PALM3A6NDB9 673 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-210ENST00000635675 SEC24BO95487 1268 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 PARP1P09874 1014 aaKnown RBP11.37□□□□□ -0.59
LINC00339-210ENST00000635675 XRCC5P13010 732 aaKnown RBP11.37□□□□□ -0.59
LINC00339-210ENST00000635675 COPB2P35606 906 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 SNAP25P60880 206 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 GRB14Q14449 540 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 GRM4Q14833 912 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 WDR78Q5VTH9 848 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
LINC00339-210ENST00000635675 SGMS1Q86VZ5 419 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 ABRAQ8N0Z2 381 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 STAG2Q8N3U4 1231 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 SOCS4Q8WXH5 440 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 ARMC5Q96C12 935 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 AGBL1Q96MI9 1066 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 JAKMIP1Q96N16 626 aaKnown RBP11.37□□□□□ -0.59
LINC00339-210ENST00000635675 LRRC2Q9BYS8 371 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 UBA5Q9GZZ9 404 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 CPVLQ9H3G5 476 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 MAD2L2Q9UI95 211 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 CTDP1Q9Y5B0 961 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-210ENST00000635675 IVNS1ABPQ9Y6Y0 642 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 HTTP42858 3142 aa11.37□□□□□ -0.59
LINC00339-210ENST00000635675 KLRF2D3W0D1 207 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 ADCY3O60266 1144 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 EIF5BO60841 1220 aaKnown RBP11.36□□□□□ -0.59
LINC00339-210ENST00000635675 HOXC6P09630 235 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 CYP2B6P20813 491 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 GRK4P32298 578 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 C8orf34Q49A92 452 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 TCEANC2Q96MN5 208 aa11.36□□□□□ -0.59
LINC00339-210ENST00000635675 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms