RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 SOGA3Q5TF21 947 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 CDCP2Q5VXM1 449 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 OVOS1Q6IE37 1185 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 DPH6Q7L8W6 267 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 MCATQ8IVS2 390 aaKnown RBP4.05□□□□□ -1.76
PSPC1-208ENST00000635562 C19orf47Q8N9M1 422 aaKnown RBP4.05□□□□□ -1.76
PSPC1-208ENST00000635562 KCNN1Q92952 543 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 CCDC136Q96JN2 1154 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 FERD3LQ96RJ6 166 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 CNNM2Q9H8M5 875 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 GPATCH2Q9NW75 528 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 PPP1R1BQ9UD71 204 aaPredicted RBP4.05□□□□□ -1.76
PSPC1-208ENST00000635562 KCNH3Q9ULD8 1083 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 RIPOR2Q9Y4F9 1068 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 MRVI1Q9Y6F6 885 aa4.05□□□□□ -1.76
PSPC1-208ENST00000635562 DNAJC25-GNG10A0A024R161 153 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 CHURC1-FNTBB4DL54 471 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 ETV2O00321 342 aaPredicted RBP4.04□□□□□ -1.76
PSPC1-208ENST00000635562 MAFGO15525 162 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 PEX10O60683 326 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 ESR1P03372 595 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 PGRP06401 933 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 INHBBP09529 407 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 NME1P15531 152 aaKnown RBP4.04□□□□□ -1.76
PSPC1-208ENST00000635562 CTSWP56202 376 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 CHRNEQ04844 493 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 SNX17Q15036 470 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 INTS3Q68E01 1043 aaKnown RBP4.04□□□□□ -1.76
PSPC1-208ENST00000635562 ANKS3Q6ZW76 656 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 EXOC8Q8IYI6 725 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 SLFN12Q8IYM2 578 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 ZNF526Q8TF50 670 aaPredicted RBP4.04□□□□□ -1.76
PSPC1-208ENST00000635562 MKL1Q969V6 931 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 ATG4CQ96DT6 458 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 NAP1L5Q96NT1 182 aaPredicted RBP4.04□□□□□ -1.76
PSPC1-208ENST00000635562 TM9SF2Q99805 663 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 GPR62Q9BZJ7 368 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 GMIPQ9P107 970 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 SMG5Q9UPR3 1016 aaKnown RBP4.04□□□□□ -1.76
PSPC1-208ENST00000635562 MSRB2Q9Y3D2 182 aa4.04□□□□□ -1.76
PSPC1-208ENST00000635562 UPK3BL1B0FP48 263 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 UPK3BL2E5RIL1 263 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 RFXAPO00287 272 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 SMAD7O15105 426 aaKnown RBP4.03□□□□□ -1.76
PSPC1-208ENST00000635562 ACRP10323 421 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 GUCY2CP25092 1073 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 TPP2P29144 1249 aaPredicted RBP4.03□□□□□ -1.76
PSPC1-208ENST00000635562 HK2P52789 917 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 DUSP4Q13115 394 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 RAB33AQ14088 237 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 GAB4Q2WGN9 574 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 TNNI3KQ59H18 835 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 RALGPS1Q5JS13 557 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 RUFY4Q6ZNE9 571 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 NLRC3Q7RTR2 1065 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 CREG2Q8IUH2 290 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 SPPL2CQ8IUH8 684 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 TMEM151BQ8IW70 566 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 CKAP2LQ8IYA6 745 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 RIN3Q8TB24 985 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 CPLX3Q8WVH0 158 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 HNRNPLLQ8WVV9 542 aaKnown RBP4.03□□□□□ -1.76
PSPC1-208ENST00000635562 ANAPC16Q96DE5 110 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 TMEM87BQ96K49 555 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 DUSP13Q9UII6 198 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 CEP131Q9UPN4 1083 aa4.03□□□□□ -1.76
PSPC1-208ENST00000635562 CNTNAP4Q9C0A0 1308 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 A0A0U1RQG5 324 aaPredicted RBP4.02□□□□□ -1.77
PSPC1-208ENST00000635562 A0A1W2PQH9 124 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 ZEB1P37275 1124 aaPredicted RBP4.02□□□□□ -1.77
PSPC1-208ENST00000635562 CCDC144BQ3MJ40 725 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 NOL8Q76FK4 1167 aaKnown RBP4.02□□□□□ -1.77
PSPC1-208ENST00000635562 CDH24Q86UP0 819 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 TSPYL5Q86VY4 417 aaPredicted RBP4.02□□□□□ -1.77
PSPC1-208ENST00000635562 CELF2-AS1Q8N7Q2 184 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 PMFBP1Q8TBY8 1022 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 XAGE3Q8WTP9 111 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 CYB5D2Q8WUJ1 264 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 CRBNQ96SW2 442 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 PLCD4Q9BRC7 762 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 OSBPL2Q9H1P3 480 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 PIF1Q9H611 641 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 ACTR10Q9NZ32 417 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 SIRPGQ9P1W8 387 aa4.02□□□□□ -1.77
PSPC1-208ENST00000635562 LTBP3Q9NS15 1303 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 TEX51A0A1B0GUA7 166 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 RGS13O14921 159 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 CCNFP41002 786 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 YARSP54577 528 aaKnown RBP4.01□□□□□ -1.77
PSPC1-208ENST00000635562 EGR3Q06889 387 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 MLECQ14165 292 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 RASA3Q14644 834 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 ZYXQ15942 572 aaKnown RBP4.01□□□□□ -1.77
PSPC1-208ENST00000635562 ZNF385BQ569K4 471 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 HSP90AB4PQ58FF6 505 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 ARSHQ5FYA8 562 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 FBXW10Q5XX13 1052 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 UNC5AQ6ZN44 842 aa4.01□□□□□ -1.77
PSPC1-208ENST00000635562 LRP10Q7Z4F1 713 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms