RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ZBED4O75132 1171 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 SLC25A27O95847 323 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 HMGB1P09429 215 aaKnown RBP17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 COPB2P35606 906 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 PRKCZQ05513 592 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 IRF5Q13568 498 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 PLS1Q14651 629 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 ASPRV1Q53RT3 343 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 TMEM67Q5HYA8 995 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 GPR142Q7Z601 462 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 RASEFQ8IZ41 740 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 IGDCC4Q8TDY8 1250 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 NEK1Q96PY6 1258 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 MROH8Q9H579 483 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 CTDP1Q9Y5B0 961 aaPredicted RBP17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 PTCH2Q9Y6C5 1203 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 FRMPD2Q68DX3 1309 aaPredicted RBP17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 CHST3Q7LGC8 479 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 RIOX2Q8IUF8 465 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 TMTC2Q8N394 836 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 RAET1EQ8TD07 263 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 ABHD8Q96I13 439 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 TEX13BQ9BXU2 312 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 USP26Q9BXU7 913 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 PRR12Q9ULL5 1215 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 GABRQQ9UN88 632 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 HPS5Q9UPZ3 1129 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 IVNS1ABPQ9Y6Y0 642 aa17.26■□□□□ 0.35
CDC42BPB-209ENST00000634889 STRNO43815 780 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 ERCC3P19447 782 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 STAT3P40763 770 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 FLT3LGP49771 235 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 ADCK5Q3MIX3 580 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 DHX32Q7L7V1 743 aaKnown RBP17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 CHMP4CQ96CF2 233 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 LY9Q9HBG7 655 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 GJD2Q9UKL4 321 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 SNX14Q9Y5W7 946 aa17.25■□□□□ 0.35
CDC42BPB-209ENST00000634889 SLC15A5A6NIM6 579 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 SH2B2O14492 632 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 PARP1P09874 1014 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 LIFRP42702 1097 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 SLC9C1Q4G0N8 1177 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 MORN1Q5T089 497 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 SYDE2Q5VT97 1194 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 WDR78Q5VTH9 848 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 SNRNP48Q6IEG0 339 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 TTBK2Q6IQ55 1244 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 NCAPG2Q86XI2 1143 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 ABRAQ8N0Z2 381 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 PXYLP1Q8TE99 480 aa17.24■□□□□ 0.35
CDC42BPB-209ENST00000634889 CENPFP49454 3210 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 DOCK3Q8IZD9 2030 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 XRCC5P13010 732 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 PTPREP23469 700 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 SLC16A2P36021 539 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 GRB14Q14449 540 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 CATIPQ7Z7H3 387 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 SLAIN1Q8ND83 568 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 USP6NLQ92738 828 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 ARMC5Q96C12 935 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 MAP3K14Q99558 947 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 RANBP17Q9H2T7 1088 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 SENP2Q9HC62 589 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 PNMA2Q9UL42 364 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
CDC42BPB-209ENST00000634889 DDAH1O94760 285 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 PSMA5P28066 241 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 GRK4P32298 578 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 RGS2P41220 211 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 TROAPQ12815 778 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 MAP2K5Q13163 448 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 COL9A3Q14050 684 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 CPXCR1Q8N123 301 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 APBA2Q99767 749 aa17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-209ENST00000634889 ZNF536O15090 1300 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 CCDC69A6NI79 296 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 ADCY3O60266 1144 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 ICAM1P05362 532 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 CALM1P0DP23 149 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 CALM2P0DP24 149 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 CALM3P0DP25 149 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 FCER1AP12319 257 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 GRM4Q14833 912 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 BLOC1S2Q6QNY1 142 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 NFXL1Q6ZNB6 911 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 TRMT44Q8IYL2 757 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms