RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	NOM1	Q5C9Z4	860 aa	Known RBP	30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	APOA5	Q6Q788	366 aa		30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	POTEE	Q6S8J3	1075 aa		30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	MB21D1	Q8N884	522 aa		30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	CTCFL	Q8NI51	663 aa	Predicted RBP	30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	MORF4L1	Q9UBU8	362 aa		30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	MAD2L2	Q9UI95	211 aa		30.35	■■■□□ 2.45
UBE3A-222	ENST00000630907	PALM3	A6NDB9	673 aa	Predicted RBP	30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	CTCF	P49711	727 aa	Predicted RBP	30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	NEK4	P51957	841 aa		30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	SYDE2	Q5VT97	1194 aa		30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	STAG2	Q8N3U4	1231 aa		30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	TXNRD2	Q9NNW7	524 aa		30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	PRR12	Q9ULL5	1215 aa		30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	NAP1L2	Q9ULW6	460 aa	Predicted RBP	30.34	■■■□□ 2.45
UBE3A-222	ENST00000630907	VWA5A	O00534	786 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	ZBTB43	O43298	467 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	ZBED4	O75132	1171 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	HSPA8	P11142	646 aa	Known RBP	30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	RXRA	P19793	462 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	KIF5B	P33176	963 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	FAM110C	Q1W6H9	321 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	MICU3	Q86XE3	530 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	RAB11FIP4	Q86YS3	637 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	GPRC5A	Q8NFJ5	357 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	UBA5	Q9GZZ9	404 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	BTBD7	Q9P203	1132 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	RLF	Q13129	1914 aa		30.33	■■■□□ 2.45
UBE3A-222	ENST00000630907	KLRF2	D3W0D1	207 aa		30.32	■■■□□ 2.44
UBE3A-222	ENST00000630907	PEX10	O60683	326 aa		30.32	■■■□□ 2.44
UBE3A-222	ENST00000630907	CNMD	O75829	334 aa		30.32	■■■□□ 2.44
UBE3A-222	ENST00000630907	FDX1	P10109	184 aa		30.32	■■■□□ 2.44
UBE3A-222	ENST00000630907	SP3	Q02447	781 aa		30.32	■■■□□ 2.44
UBE3A-222	ENST00000630907	CTDP1	Q9Y5B0	961 aa	Predicted RBP	30.32	■■■□□ 2.44
UBE3A-222	ENST00000630907	FKTN	O75072	461 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	RCAN1	P53805	252 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	EVC	P57679	992 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	ERVK-9	P63128	1117 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	ERVK-24	P63145	666 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	ANKRD1	Q15327	319 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	CCDC144CP	Q8IYA2	1237 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	FANCB	Q8NB91	859 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	SLC38A10	Q9HBR0	1119 aa		30.31	■■■□□ 2.44
UBE3A-222	ENST00000630907	RABEP1	Q15276	862 aa		30.3	■■■□□ 2.44
UBE3A-222	ENST00000630907		Q3C1V9	767 aa		30.3	■■■□□ 2.44
UBE3A-222	ENST00000630907	REPS2	Q8NFH8	660 aa		30.3	■■■□□ 2.44
UBE3A-222	ENST00000630907	ZNF296	Q8WUU4	475 aa	Predicted RBP	30.3	■■■□□ 2.44
UBE3A-222	ENST00000630907	CPVL	Q9H3G5	476 aa		30.3	■■■□□ 2.44
UBE3A-222	ENST00000630907	PARP14	Q460N5	1801 aa		30.3	■■■□□ 2.44
UBE3A-222	ENST00000630907	GOLGA8B	A8MQT2	603 aa		30.29	■■■□□ 2.44
UBE3A-222	ENST00000630907	GNAQ	P50148	359 aa		30.29	■■■□□ 2.44
UBE3A-222	ENST00000630907	AK2	P54819	239 aa		30.29	■■■□□ 2.44
UBE3A-222	ENST00000630907	TMEM132B	Q14DG7	1078 aa		30.29	■■■□□ 2.44
UBE3A-222	ENST00000630907	PCNT	O95613	3336 aa		30.29	■■■□□ 2.44
UBE3A-222	ENST00000630907	GOLGA8A	A7E2F4	631 aa		30.28	■■■□□ 2.44
UBE3A-222	ENST00000630907	LBX1	P52954	281 aa		30.28	■■■□□ 2.44
UBE3A-222	ENST00000630907	PLS1	Q14651	629 aa		30.28	■■■□□ 2.44
UBE3A-222	ENST00000630907	RTN1	Q16799	776 aa		30.28	■■■□□ 2.44
UBE3A-222	ENST00000630907	LZTS2	Q9BRK4	669 aa		30.28	■■■□□ 2.44
UBE3A-222	ENST00000630907	LARP6	Q9BRS8	491 aa	Known RBP	30.28	■■■□□ 2.44
UBE3A-222	ENST00000630907	DHX16	O60231	1041 aa	Known RBP	30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	METAP2	P50579	478 aa	Known RBP eCLIP	30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	SNAP25	P60880	206 aa		30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	CCNA1	P78396	465 aa		30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	ADGRF4	Q8IZF3	695 aa		30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	SPATC1L	Q9H0A9	340 aa		30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	RANBP17	Q9H2T7	1088 aa	Known RBP	30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	VAT1L	Q9HCJ6	419 aa		30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	RBM28	Q9NW13	759 aa	Known RBP	30.27	■■■□□ 2.44
UBE3A-222	ENST00000630907	PDIA3	P30101	505 aa	Known RBP	30.26	■■■□□ 2.43
UBE3A-222	ENST00000630907	CPXCR1	Q8N123	301 aa		30.26	■■■□□ 2.43
UBE3A-222	ENST00000630907	ZNF274	Q96GC6	653 aa	Predicted RBP	30.26	■■■□□ 2.43
UBE3A-222	ENST00000630907	ERO1A	Q96HE7	468 aa		30.26	■■■□□ 2.43
UBE3A-222	ENST00000630907	ZNF214	Q9UL59	606 aa	Predicted RBP	30.26	■■■□□ 2.43
UBE3A-222	ENST00000630907	HPS5	Q9UPZ3	1129 aa		30.26	■■■□□ 2.43
UBE3A-222	ENST00000630907		A0A0G2JMZ2	1700 aa		30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	STAT3	P40763	770 aa		30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	OAZ1	P54368	228 aa		30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	LACTB	P83111	547 aa	Predicted RBP	30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	KIF22	Q14807	665 aa		30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	PPP2R5B	Q15173	497 aa		30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	CCDC174	Q6PII3	467 aa		30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	JMJD4	Q9H9V9	463 aa		30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	RAVER2	Q9HCJ3	691 aa	Known RBP	30.25	■■■□□ 2.43
UBE3A-222	ENST00000630907	ATP2A1	O14983	1001 aa		30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	PLEKHA8P1	O95397	391 aa		30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	SMARCA1	P28370	1054 aa		30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	NBPF11	Q86T75	865 aa		30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	CCAR1	Q8IX12	1150 aa	Known RBP	30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	CD99L2	Q8TCZ2	262 aa		30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	MOV10L1	Q9BXT6	1211 aa	Known RBP	30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	TEX13B	Q9BXU2	312 aa		30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	RIOX1	Q9H6W3	641 aa		30.24	■■■□□ 2.43
UBE3A-222	ENST00000630907	CCDC196	A0A1B0GTZ2	297 aa		30.23	■■■□□ 2.43
UBE3A-222	ENST00000630907	SLC35G1	Q2M3R5	365 aa		30.23	■■■□□ 2.43
UBE3A-222	ENST00000630907	TMTC3	Q6ZXV5	915 aa		30.23	■■■□□ 2.43
UBE3A-222	ENST00000630907	IL27	Q8NEV9	243 aa		30.23	■■■□□ 2.43
UBE3A-222	ENST00000630907	FAM217B	Q9NTX9	383 aa	Predicted RBP	30.23	■■■□□ 2.43
UBE3A-222	ENST00000630907	TPCN1	Q9ULQ1	816 aa		30.23	■■■□□ 2.43

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms