RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	VHLL	Q6RSH7	139 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	ANAPC16	Q96DE5	110 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	HAUS7	Q99871	368 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	KLHL25	Q9H0H3	589 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	GBP3	Q9H0R5	595 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	PRDM7	Q9NQW5	492 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	GFOD1	Q9NXC2	390 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	ACTR10	Q9NZ32	417 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	SLAMF8	Q9P0V8	285 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	TNFRSF10D	Q9UBN6	386 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	ZNF451	Q9Y4E5	1061 aa		4.88	□□□□□ -1.63
CNOT1-223	ENST00000628857	SMAD7	O15105	426 aa	Known RBP	4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	VAV1	P15498	845 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	DNAJA1	P31689	397 aa	Known RBP	4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	ETFB	P38117	255 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	CTSK	P43235	329 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	POU4F1	Q01851	419 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	FXN	Q16595	210 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	RALGPS1	Q5JS13	557 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	DCAF15	Q66K64	600 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	CWF19L1	Q69YN2	538 aa	Known RBP	4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	HEATR6	Q6AI08	1181 aa	Known RBP	4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	ZSWIM9	Q86XI8	627 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	ARHGEF39	Q8N4T4	335 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	FCRL2	Q96LA5	508 aa	Predicted RBP	4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	G6PC3	Q9BUM1	346 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	EPN3	Q9H201	632 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	ZNF408	Q9H9D4	720 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	SP110	Q9HB58	689 aa		4.87	□□□□□ -1.63
CNOT1-223	ENST00000628857	TMEM82	A0PJX8	343 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	TP53	P04637	393 aa	Predicted RBP	4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	GLI1	P08151	1106 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	SYP	P08247	313 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	TXK	P42681	527 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	GRB10	Q13322	594 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	NBPF6	Q5VWK0	638 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	TDRD10	Q5VZ19	366 aa	Known RBP	4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	KIAA1211L	Q6NV74	962 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	MYLIP	Q8WY64	445 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	KIRREL1	Q96J84	757 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	NBPF4	Q96M43	638 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	APBA2	Q99767	749 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	DSCC1	Q9BVC3	393 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	FOXP3	Q9BZS1	431 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	CWC22	Q9HCG8	908 aa	Known RBP	4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	SUSD2	Q9UGT4	822 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857	CARMIL2	Q6F5E8	1435 aa		4.86	□□□□□ -1.63
CNOT1-223	ENST00000628857		A0A1W2PQ45	241 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857		A0A1W2PQY0	241 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	FAM86C2P	A6NEL3	165 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	RBAK-RBAKDN	I3L0D1	243 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	KLF4	O43474	513 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	EPHX1	P07099	455 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	RBL2	Q08999	1139 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	KCNMB1	Q16558	191 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	TMEM67	Q5HYA8	995 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	POMZP3	Q6PJE2	187 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	FIBCD1	Q8N539	461 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	ABHD4	Q8TB40	342 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	FAM168A	Q92567	244 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	MAP6	Q96JE9	813 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	SLC12A9	Q9BXP2	914 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	MRVI1	Q9Y6F6	885 aa		4.85	□□□□□ -1.63
CNOT1-223	ENST00000628857	FADS2P1	A8MWK0	482 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	NRDC	O43847	1150 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	ATP2B1	P20020	1258 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	RPL10	P27635	214 aa	Known RBP	4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	HK2	P52789	917 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	RTP2	Q5QGT7	225 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	RCSD1	Q6JBY9	416 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	CYP2R1	Q6VVX0	501 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	WAPL	Q7Z5K2	1190 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	FAM178B	Q8IXR5	827 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	NLGN2	Q8NFZ4	835 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	ZNF669	Q96BR6	464 aa	Predicted RBP	4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	CRTAC1	Q9NQ79	661 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	EBF1	Q9UH73	591 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	PCDHB10	Q9UN67	800 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	RNF114	Q9Y508	228 aa		4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.84	□□□□□ -1.63
CNOT1-223	ENST00000628857	WTIP	A6NIX2	430 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857		H0Y8X5	98 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	RAB33A	Q14088	237 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	SF3A1	Q15459	793 aa	Known RBP	4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	SOGA3	Q5TF21	947 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	FYB2	Q5VWT5	728 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	HLA-DQA1	Q5Y7H0	255 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	EEF1DP3	Q658K8	133 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	ADAT2	Q7Z6V5	191 aa	Known RBP	4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	POU5F2	Q8N7G0	328 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	BVES	Q8NE79	360 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	BRF1	Q92994	677 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	HHIPL1	Q96JK4	782 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	CCDC140	Q96MF4	163 aa		4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	FCRL3	Q96P31	734 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT1-223	ENST00000628857	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms