RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	KIF2C	Q99661	725 aa		5.78	□□□□□ -1.48
UBE2A-208	ENST00000628734	HDAC8	Q9BY41	377 aa		5.78	□□□□□ -1.48
UBE2A-208	ENST00000628734	SIRT5	Q9NXA8	310 aa		5.78	□□□□□ -1.48
UBE2A-208	ENST00000628734	GMIP	Q9P107	970 aa		5.78	□□□□□ -1.48
UBE2A-208	ENST00000628734	OR14I1	A6ND48	311 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	MINDY4B	A8MYZ0	360 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	N4BP3	O15049	544 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	DUSP4	Q13115	394 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	SNX17	Q15036	470 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	TMEFF1	Q8IYR6	380 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	ANKS4B	Q8N8V4	417 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	CNTD2	Q9H8S5	307 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	COPRS	Q9NQ92	184 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	SRRD	Q9UH36	339 aa		5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.77	□□□□□ -1.49
UBE2A-208	ENST00000628734	MATN3	O15232	486 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	EIF4A3	P38919	411 aa	Known RBP	5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	CRK	P46108	304 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	RNF4	P78317	190 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	NMI	Q13287	307 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	MLEC	Q14165	292 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	MRPL58	Q14197	206 aa	Known RBP	5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	CDCP2	Q5VXM1	449 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	CNKSR3	Q6P9H4	555 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	RNF111	Q6ZNA4	994 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	SPPL2C	Q8IUH8	684 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	DAGLB	Q8NCG7	672 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	SYTL4	Q96C24	671 aa	Predicted RBP	5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	EHMT1	Q9H9B1	1298 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734	PALD1	Q9ULE6	856 aa		5.76	□□□□□ -1.49
UBE2A-208	ENST00000628734		K7ESM1	405 aa		5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	IRS4	O14654	1257 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	TLR3	O15455	904 aa	Known RBP	5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	GBP1	P32455	592 aa		5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	ARSH	Q5FYA8	562 aa		5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	OVOS1	Q6IE37	1185 aa		5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	USHBP1	Q8N6Y0	703 aa		5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	BRMS1	Q9HCU9	246 aa		5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	PCDHB14	Q9Y5E9	798 aa		5.75	□□□□□ -1.49
UBE2A-208	ENST00000628734	RAG1	P15918	1043 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	SDHB	P21912	280 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	VIPR1	P32241	457 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	CCNF	P41002	786 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	ZNF827	Q17R98	1081 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	CLEC16A	Q2KHT3	1053 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	NBPF9	Q3BBW0	867 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	FAM129C	Q86XR2	697 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	REXO1	Q8N1G1	1221 aa	Known RBP	5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	ZNF655	Q8N720	491 aa	Predicted RBP	5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	LINC01356	Q8N9X3	169 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	SORCS2	Q96PQ0	1159 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	CNNM2	Q9H8M5	875 aa		5.74	□□□□□ -1.49
UBE2A-208	ENST00000628734	TMEM82	A0PJX8	343 aa		5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	MEIS3P2	A8K0S8	358 aa		5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	CDR1	P51861	262 aa		5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	RAD51AP2	Q09MP3	1159 aa		5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	NPM2	Q86SE8	214 aa	Known RBP	5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	ZNF296	Q8WUU4	475 aa	Predicted RBP	5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	TCTN2	Q96GX1	697 aa		5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	MENT	Q9BUN1	341 aa		5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	ADAMTS1	Q9UHI8	967 aa		5.73	□□□□□ -1.49
UBE2A-208	ENST00000628734	HRK	O00198	91 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	POLR2B	P30876	1174 aa	Known RBP	5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	KIR2DL1	P43626	348 aa	Predicted RBP	5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	KIR2DL2	P43627	348 aa	Predicted RBP	5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	HMGA2	P52926	109 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	SNW1	Q13573	536 aa	Known RBP	5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	BBS9	Q3SYG4	887 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	HS2ST1	Q7LGA3	356 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	NLRC3	Q7RTR2	1065 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	TMC3	Q7Z5M5	1100 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	NLRX1	Q86UT6	975 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	LINC00116	Q8NCU8	138 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	ATG4C	Q96DT6	458 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	MAP6	Q96JE9	813 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	PWWP2A	Q96N64	755 aa		5.72	□□□□□ -1.49
UBE2A-208	ENST00000628734	TNFRSF10C	O14798	259 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	SIGLEC6	O43699	453 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	NRDC	O43847	1150 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	MAGEA10	P43363	369 aa	Predicted RBP	5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	PCBP3	P57721	371 aa	Known RBP	5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	CHMP4BP1	P59074	171 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	ZPBP2	Q6X784	338 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	MZB1	Q8WU39	189 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	BCL2L13	Q9BXK5	485 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	FOXP3	Q9BZS1	431 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	GZF1	Q9H116	711 aa	Predicted RBP	5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	UBP1	Q9NZI7	540 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	GGT7	Q9UJ14	662 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	TCFL5	Q9UL49	500 aa		5.71	□□□□□ -1.5
UBE2A-208	ENST00000628734	USP2	O75604	605 aa	Predicted RBP	5.7	□□□□□ -1.5
UBE2A-208	ENST00000628734	PRAMEF1	O95521	474 aa		5.7	□□□□□ -1.5
UBE2A-208	ENST00000628734	RPL10	P27635	214 aa	Known RBP	5.7	□□□□□ -1.5
UBE2A-208	ENST00000628734	CEBPA	P49715	358 aa	Predicted RBP	5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms