RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 PGK2P07205 417 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 SLC3A2P08195 630 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 RTP1P59025 263 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 PPARAQ07869 468 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 SNX17Q15036 470 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 LRRC41Q15345 812 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 C1orf53Q5VUE5 145 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 NAPBQ9H115 298 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 FEM1BQ9UK73 627 aa14.84□□□□□ -0.03
SOX2-OT-247ENST00000628347 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 ZBED4O75132 1171 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 FDX1P10109 184 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 OAZ1P54368 228 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 HDAC1Q13547 482 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 FAM47AQ5JRC9 791 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 ANO1Q5XXA6 986 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 SNRNP48Q6IEG0 339 aaKnown RBP14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 SLC39A5Q6ZMH5 540 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 TICAM2Q86XR7 235 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 SLC38A10Q9HBR0 1119 aa14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.04
SOX2-OT-247ENST00000628347 LTBP2Q14767 1821 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 FOXP2O15409 715 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 ZNF865P0CJ78 1059 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 TSPY3P0CV98 308 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 TSPY8P0CW00 308 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 RARBP10826 455 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 MAMDC4Q6UXC1 1216 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 PHF24Q9UPV7 400 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 RIPK3Q9Y572 518 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
SOX2-OT-247ENST00000628347 BMP3P12645 472 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 AKR1A1P14550 325 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 MDM2Q00987 491 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 TFAP4Q01664 338 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 SLFN13Q68D06 897 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 LRRC47Q8N1G4 583 aaKnown RBP14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 CHST13Q8NET6 341 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 KIFC2Q96AC6 838 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 EVI5LQ96CN4 794 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 LBHD1Q9BQE6 289 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 XPNPEP3Q9NQH7 507 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 FBXO40Q9UH90 709 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 ANAPC4Q9UJX5 808 aa14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 CTDP1Q9Y5B0 961 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-247ENST00000628347 PLA2G6O60733 806 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 TAL1P17542 331 aaPredicted RBP14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 ADCYAP1R1P41586 468 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 PDE1AP54750 535 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 AAMPQ13685 434 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 ALX1Q15699 326 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 RNF180Q86T96 592 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 FAM160B2Q86V87 743 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 DDX11Q96FC9 970 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 GMCL1Q96IK5 515 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 RAVER2Q9HCJ3 691 aaKnown RBP14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 HELLSQ9NRZ9 838 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 CNPY2Q9Y2B0 182 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 ATP11BQ9Y2G3 1177 aa14.8□□□□□ -0.04
SOX2-OT-247ENST00000628347 ADAMTS4O75173 837 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 SNAI1O95863 264 aaPredicted RBP14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 FGRP09769 529 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 NOVP48745 357 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 STAT2P52630 851 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 CCDC129Q6ZRS4 1044 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 CPXCR1Q8N123 301 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 CHURC1Q8WUH1 139 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 TSEN34Q9BSV6 310 aaKnown RBP14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 COL6A3P12111 3177 aa14.79□□□□□ -0.04
SOX2-OT-247ENST00000628347 TMEM232C9JQI7 657 aa14.78□□□□□ -0.04
SOX2-OT-247ENST00000628347 ORC4O43929 436 aa14.78□□□□□ -0.04
SOX2-OT-247ENST00000628347 TRIM60Q495X7 471 aa14.78□□□□□ -0.04
SOX2-OT-247ENST00000628347 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
SOX2-OT-247ENST00000628347 FGD4Q96M96 766 aa14.78□□□□□ -0.04
SOX2-OT-247ENST00000628347 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
SOX2-OT-247ENST00000628347 FAM184BQ9ULE4 1060 aa14.78□□□□□ -0.04
SOX2-OT-247ENST00000628347 ZMYM6O95789 1325 aa14.77□□□□□ -0.04
SOX2-OT-247ENST00000628347 TSPY2A6NKD2 308 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 PGK1P00558 417 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 SLC1A4P43007 532 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 CTDSPL2Q05D32 466 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 TKFCQ3LXA3 575 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 VPS53Q5VIR6 699 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 ANKRD35Q8N283 1001 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 KLHDC9Q8NEP7 349 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 FERMT2Q96AC1 680 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 IL17RBQ9NRM6 502 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 TACC3Q9Y6A5 838 aa14.77□□□□□ -0.05
SOX2-OT-247ENST00000628347 ZNF536O15090 1300 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 SYNRGQ9UMZ2 1314 aa14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 A0A1W2PQ45 241 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-247ENST00000628347 A0A1W2PQY0 241 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms