RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 L3MBTL2Q969R5 705 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 RBCK1Q9BYM8 510 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 NACA2Q9H009 215 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 RBSNQ9H1K0 784 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 ZSCAN16Q9H4T2 348 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 ZNF395Q9H8N7 513 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 ZFAND3Q9H8U3 227 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 TUBA8Q9NY65 449 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 PKD2L1Q9P0L9 805 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 HRH3Q9Y5N1 445 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 V9GY48 417 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 ROCK2O75116 1388 aaKnown RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 EIF3AQ14152 1382 aaKnown RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 ERC2O15083 957 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 ACTN2P35609 894 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 ZNF132P52740 706 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 SLC8A3P57103 927 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 SFMBT2Q5VUG0 894 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 TMC7Q7Z402 723 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 MFN1Q8IWA4 741 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 C16orf71Q8IYS4 520 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 ALDH16A1Q8IZ83 802 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 MYO1HQ8N1T3 1032 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 KDF1Q8NAX2 398 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 C1orf131Q8NDD1 294 aaKnown RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 CTCFLQ8NI51 663 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 GIMAP1Q8WWP7 306 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 KCNB2Q92953 911 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 SNX21Q969T3 373 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 SAAL1Q96ER3 474 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 MYO19Q96H55 970 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 MPP4Q96JB8 637 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 DHRS1Q96LJ7 313 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 SCLT1Q96NL6 688 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 CITED4Q96RK1 184 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 NRDE2Q9H7Z3 1164 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 LUC7LQ9NQ29 371 aaKnown RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 RGL1Q9NZL6 768 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 KIAA1522Q9P206 1035 aaPredicted RBP9.48□□□□□ -0.89
SMN2-214ENST00000626847 NRBP1Q9UHY1 535 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 MCM8Q9UJA3 840 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 ITM2BQ9Y287 266 aa9.48□□□□□ -0.89
SMN2-214ENST00000626847 IGSF1Q8N6C5 1336 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 USP6P35125 1406 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 CICQ96RK0 1608 aaPredicted RBP9.47□□□□□ -0.89
SMN2-214ENST00000626847 EIF3CLB5ME19 914 aaKnown RBP9.47□□□□□ -0.89
SMN2-214ENST00000626847 J3QL48 77 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 EML1O00423 815 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 TNFRSF10BO14763 440 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 CEP104O60308 925 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 RTN2O75298 545 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 GCP02774 474 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 HOXD10P28358 340 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 RAB27AP51159 221 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 MLLT1Q03111 559 aaPredicted RBP9.47□□□□□ -0.89
SMN2-214ENST00000626847 INF2Q27J81 1249 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 SLC27A3Q5K4L6 730 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 MSL1Q68DK7 614 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 RCSD1Q6JBY9 416 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 GBP7Q8N8V2 638 aaPredicted RBP9.47□□□□□ -0.89
SMN2-214ENST00000626847 FAM81AQ8TBF8 368 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 SCYL1Q96KG9 808 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 EIF3CQ99613 913 aaKnown RBP9.47□□□□□ -0.89
SMN2-214ENST00000626847 IGSF5Q9NSI5 407 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 CCDC87Q9NVE4 849 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 LRFN2Q9ULH4 789 aa9.47□□□□□ -0.89
SMN2-214ENST00000626847 BTAF1O14981 1849 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 MTRF1O75570 445 aaKnown RBP9.46□□□□□ -0.9
SMN2-214ENST00000626847 MYL1P05976 194 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 SH3BGRP55822 239 aaPredicted RBP9.46□□□□□ -0.9
SMN2-214ENST00000626847 PREPLQ4J6C6 727 aaPredicted RBP9.46□□□□□ -0.9
SMN2-214ENST00000626847 SH3PXD2AQ5TCZ1 1133 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 FBXO33Q7Z6M2 555 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 ARHGEF25Q86VW2 580 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 SMARCC1Q92922 1105 aaPredicted RBP9.46□□□□□ -0.9
SMN2-214ENST00000626847 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 DHTKD1Q96HY7 919 aaPredicted RBP9.46□□□□□ -0.9
SMN2-214ENST00000626847 RBM17Q96I25 401 aaKnown RBP9.46□□□□□ -0.9
SMN2-214ENST00000626847 YIPF2Q9BWQ6 316 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.9
SMN2-214ENST00000626847 LMCD1Q9NZU5 365 aa9.46□□□□□ -0.9
SMN2-214ENST00000626847 CCDC194A0A1B0GVG4 234 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 SLC27A2O14975 620 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 IGHDP01880 384 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 HIRAP54198 1017 aaPredicted RBP9.45□□□□□ -0.9
SMN2-214ENST00000626847 TAGLNQ01995 201 aaKnown RBP9.45□□□□□ -0.9
SMN2-214ENST00000626847 DGKZQ13574 1117 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 SEPT7Q16181 437 aaKnown RBP9.45□□□□□ -0.9
SMN2-214ENST00000626847 CLPPQ16740 277 aaPredicted RBP9.45□□□□□ -0.9
SMN2-214ENST00000626847 RTN1Q16799 776 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 CCDC152Q4G0S7 254 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 RRP12Q5JTH9 1297 aaKnown RBP9.45□□□□□ -0.9
SMN2-214ENST00000626847 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 PCGF5Q86SE9 256 aa9.45□□□□□ -0.9
SMN2-214ENST00000626847 COL23A1Q86Y22 540 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms