RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 FAM160B2Q86V87 743 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 SHCBP1Q8NEM2 672 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 IGDCC4Q8TDY8 1250 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 COA7Q96BR5 231 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 KAT14Q9H8E8 782 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 SLC38A10Q9HBR0 1119 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 MYH6P13533 1939 aa17■□□□□ 0.31
SOX2-OT-237ENST00000625581 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 PRC1O43663 620 aa16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 IRF5Q13568 498 aa16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 MORN1Q5T089 497 aa16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 PLEKHH3Q7Z736 793 aa16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 USP6NLQ92738 828 aa16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 PRR12Q9ULL5 1215 aa16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
SOX2-OT-237ENST00000625581 ZNF536O15090 1300 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 ATP2A1O14983 1001 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 EPB41L2O43491 1005 aaKnown RBP16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 ERCC3P19447 782 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 PLS1Q14651 629 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 CHURC1Q8WUH1 139 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 SOCS4Q8WXH5 440 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 ARMC5Q96C12 935 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 LY9Q9HBG7 655 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 LCTP09848 1927 aa16.98■□□□□ 0.31
SOX2-OT-237ENST00000625581 SH2B2O14492 632 aaPredicted RBP16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 GOLGA8HP0CJ92 632 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 MCM5P33992 734 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 SLC16A2P36021 539 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 STAT3P40763 770 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 IKQ13123 557 aaPredicted RBP16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 GRB14Q14449 540 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 WTAPQ15007 396 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 SART3Q15020 963 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 SYDE2Q5VT97 1194 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 RAET1EQ8TD07 263 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 MTA3Q9BTC8 594 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 TEX13BQ9BXU2 312 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 USP26Q9BXU7 913 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 RANBP17Q9H2T7 1088 aaKnown RBP16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 RIPK3Q9Y572 518 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
SOX2-OT-237ENST00000625581 ERICH2A1L162 156 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 ZBED4O75132 1171 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 SLC25A27O95847 323 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 ZKSCAN1P17029 563 aaPredicted RBP16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 PTPREP23469 700 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 OAZ1P54368 228 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 SNAP25P60880 206 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 KRT32Q14532 448 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 GPATCH4Q5T3I0 446 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 WDR78Q5VTH9 848 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 NCAPG2Q86XI2 1143 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 SH3TC2Q8TF17 1288 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 NEK1Q96PY6 1258 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 CPVLQ9H3G5 476 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 MROH8Q9H579 483 aa16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 RAVER2Q9HCJ3 691 aaKnown RBP16.96■□□□□ 0.31
SOX2-OT-237ENST00000625581 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.3
SOX2-OT-237ENST00000625581 SLC15A5A6NIM6 579 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 FDX1P10109 184 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 ELNP15502 786 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 EXOSC10Q01780 885 aaKnown RBP16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 TROAPQ12815 778 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 SLAIN1Q8ND83 568 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 ZNF333Q96JL9 665 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 TMEM87BQ96K49 555 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 LRRC2Q9BYS8 371 aa16.95■□□□□ 0.3
SOX2-OT-237ENST00000625581 ADCY3O60266 1144 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 TAL1P17542 331 aaPredicted RBP16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 GRK4P32298 578 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 COPB2P35606 906 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 MAP2K5Q13163 448 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 GRM4Q14833 912 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 CPXCR1Q8N123 301 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 PXYLP1Q8TE99 480 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 TRIB2Q92519 343 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 AGBL1Q96MI9 1066 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 TCEANC2Q96MN5 208 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 APBA2Q99767 749 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 MAD2L2Q9UI95 211 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 IVNS1ABPQ9Y6Y0 642 aa16.94■□□□□ 0.3
SOX2-OT-237ENST00000625581 FRMPD3Q5JV73 1810 aa16.93■□□□□ 0.3
SOX2-OT-237ENST00000625581 PALM3A6NDB9 673 aaPredicted RBP16.93■□□□□ 0.3
SOX2-OT-237ENST00000625581 HOXC6P09630 235 aa16.93■□□□□ 0.3
SOX2-OT-237ENST00000625581 PARP1P09874 1014 aaKnown RBP16.93■□□□□ 0.3
SOX2-OT-237ENST00000625581 XRCC5P13010 732 aaKnown RBP16.93■□□□□ 0.3
SOX2-OT-237ENST00000625581 CPA1P15085 419 aa16.93■□□□□ 0.3
SOX2-OT-237ENST00000625581 CYP2B6P20813 491 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms