RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 LENG1Q96BZ8 264 aaPredicted RBP22.67■■□□□ 1.22
SMN1-211ENST00000625245 TEX13BQ9BXU2 312 aa22.67■■□□□ 1.22
SMN1-211ENST00000625245 ZNF865P0CJ78 1059 aaPredicted RBP22.66■■□□□ 1.22
SMN1-211ENST00000625245 AKR1A1P14550 325 aa22.66■■□□□ 1.22
SMN1-211ENST00000625245 C1orf53Q5VUE5 145 aa22.66■■□□□ 1.22
SMN1-211ENST00000625245 PRPF38AQ8NAV1 312 aaKnown RBP22.66■■□□□ 1.22
SMN1-211ENST00000625245 GUCD1Q96NT3 240 aa22.66■■□□□ 1.22
SMN1-211ENST00000625245 DCTPP1Q9H773 170 aa22.66■■□□□ 1.22
SMN1-211ENST00000625245 RIPK3Q9Y572 518 aa22.66■■□□□ 1.22
SMN1-211ENST00000625245 GPAA1O43292 621 aa22.65■■□□□ 1.22
SMN1-211ENST00000625245 ZBED4O75132 1171 aa22.65■■□□□ 1.22
SMN1-211ENST00000625245 PRDM1O75626 825 aa22.65■■□□□ 1.22
SMN1-211ENST00000625245 KIFC2Q96AC6 838 aa22.65■■□□□ 1.22
SMN1-211ENST00000625245 TACC3Q9Y6A5 838 aa22.65■■□□□ 1.22
SMN1-211ENST00000625245 A0A1W2PQ45 241 aaPredicted RBP22.64■■□□□ 1.21
SMN1-211ENST00000625245 A0A1W2PQY0 241 aa22.64■■□□□ 1.21
SMN1-211ENST00000625245 M0R2C6 588 aa22.64■■□□□ 1.21
SMN1-211ENST00000625245 PQBP1O60828 265 aaKnown RBP22.64■■□□□ 1.21
SMN1-211ENST00000625245 ZFYP08048 801 aaPredicted RBP22.64■■□□□ 1.21
SMN1-211ENST00000625245 ZNF287Q9HBT7 754 aa22.64■■□□□ 1.21
SMN1-211ENST00000625245 EPB41L4AQ9HCS5 686 aaPredicted RBP22.64■■□□□ 1.21
SMN1-211ENST00000625245 ZHX1Q9UKY1 873 aaPredicted RBP22.64■■□□□ 1.21
SMN1-211ENST00000625245 ROBO3Q96MS0 1386 aa22.63■■□□□ 1.21
SMN1-211ENST00000625245 CLTBP09497 229 aa22.63■■□□□ 1.21
SMN1-211ENST00000625245 GNAT2P19087 354 aa22.63■■□□□ 1.21
SMN1-211ENST00000625245 CEP95Q96GE4 821 aa22.63■■□□□ 1.21
SMN1-211ENST00000625245 RAVER2Q9HCJ3 691 aaKnown RBP22.63■■□□□ 1.21
SMN1-211ENST00000625245 FAM184BQ9ULE4 1060 aa22.63■■□□□ 1.21
SMN1-211ENST00000625245 A0A0C4DFX4 3053 aa22.63■■□□□ 1.21
SMN1-211ENST00000625245 MCM3APO60318 1980 aa22.62■■□□□ 1.21
SMN1-211ENST00000625245 IGKV6D-41A0A0C4DH26 115 aa22.62■■□□□ 1.21
SMN1-211ENST00000625245 SNAI1O95863 264 aaPredicted RBP22.62■■□□□ 1.21
SMN1-211ENST00000625245 RAG1P15918 1043 aa22.62■■□□□ 1.21
SMN1-211ENST00000625245 LRRC47Q8N1G4 583 aaKnown RBP22.62■■□□□ 1.21
SMN1-211ENST00000625245 MSL3Q8N5Y2 521 aaKnown RBP22.62■■□□□ 1.21
SMN1-211ENST00000625245 ISY1Q9ULR0 285 aaKnown RBP22.62■■□□□ 1.21
SMN1-211ENST00000625245 SYNGAP1Q96PV0 1343 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 PATL2C9JE40 543 aaKnown RBP22.61■■□□□ 1.21
SMN1-211ENST00000625245 ADAMTS4O75173 837 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 ITGB8P26012 769 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 LRRFIP1Q32MZ4 808 aaKnown RBP22.61■■□□□ 1.21
SMN1-211ENST00000625245 IFNL3Q8IZI9 196 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 ANKRD35Q8N283 1001 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 TSEN34Q9BSV6 310 aaKnown RBP22.61■■□□□ 1.21
SMN1-211ENST00000625245 STARD7Q9NQZ5 370 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 TMEM39AQ9NV64 488 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 MTMR4Q9NYA4 1195 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 FEM1BQ9UK73 627 aa22.61■■□□□ 1.21
SMN1-211ENST00000625245 SYNRGQ9UMZ2 1314 aa22.6■■□□□ 1.21
SMN1-211ENST00000625245 LAMA2P24043 3122 aaKnown RBP22.6■■□□□ 1.21
SMN1-211ENST00000625245 DNAJC25-GNG10A0A024R161 153 aa22.6■■□□□ 1.21
SMN1-211ENST00000625245 TTLL1O95922 423 aa22.6■■□□□ 1.21
SMN1-211ENST00000625245 ACLYP53396 1101 aa22.6■■□□□ 1.21
SMN1-211ENST00000625245 MKL1Q969V6 931 aa22.6■■□□□ 1.21
SMN1-211ENST00000625245 SEC62Q99442 399 aaKnown RBP22.6■■□□□ 1.21
SMN1-211ENST00000625245 NACAP1Q9BZK3 213 aa22.6■■□□□ 1.21
SMN1-211ENST00000625245 SEMA6BQ9H3T3 888 aa22.6■■□□□ 1.21
SMN1-211ENST00000625245 CUL9Q8IWT3 2517 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 ATP2A1O14983 1001 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 KIAA0355O15063 1070 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 TSPY3P0CV98 308 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 TSPY8P0CW00 308 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 KCNA10Q16322 511 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 SLFN13Q68D06 897 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 MAMDC4Q6UXC1 1216 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 NUP133Q8WUM0 1156 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 CHMP4CQ96CF2 233 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 CDX2Q99626 313 aaPredicted RBP22.59■■□□□ 1.21
SMN1-211ENST00000625245 SLC38A10Q9HBR0 1119 aa22.59■■□□□ 1.21
SMN1-211ENST00000625245 DCDC2CA8MYV0 355 aa22.58■■□□□ 1.21
SMN1-211ENST00000625245 EPHB4P54760 987 aa22.58■■□□□ 1.21
SMN1-211ENST00000625245 SMAD3P84022 425 aaKnown RBP22.58■■□□□ 1.21
SMN1-211ENST00000625245 PDE4BQ07343 736 aa22.58■■□□□ 1.21
SMN1-211ENST00000625245 ACVR2BQ13705 512 aa22.58■■□□□ 1.21
SMN1-211ENST00000625245 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.58■■□□□ 1.21
SMN1-211ENST00000625245 KLHDC9Q8NEP7 349 aa22.58■■□□□ 1.21
SMN1-211ENST00000625245 VTI1AQ96AJ9 217 aa22.58■■□□□ 1.21
SMN1-211ENST00000625245 RNPC3Q96LT9 517 aaKnown RBP22.58■■□□□ 1.21
SMN1-211ENST00000625245 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.58■■□□□ 1.21
SMN1-211ENST00000625245 FBXO40Q9UH90 709 aa22.58■■□□□ 1.21
SMN1-211ENST00000625245 MYADML2A6NDP7 307 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 DUSP11O75319 330 aaKnown RBP22.57■■□□□ 1.2
SMN1-211ENST00000625245 SLC3A2P08195 630 aaKnown RBP22.57■■□□□ 1.2
SMN1-211ENST00000625245 BMP3P12645 472 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 TFAP4Q01664 338 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 ZNF467Q7Z7K2 595 aaPredicted RBP22.57■■□□□ 1.2
SMN1-211ENST00000625245 GMCL1P1Q8NEA9 526 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 CHST13Q8NET6 341 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 NEDD1Q8NHV4 660 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 FSD1Q9BTV5 496 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 NAPBQ9H115 298 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 HOMER2Q9NSB8 354 aa22.57■■□□□ 1.2
SMN1-211ENST00000625245 MOXD2PA6NHM9 499 aa22.56■■□□□ 1.2
SMN1-211ENST00000625245 TMEM232C9JQI7 657 aa22.56■■□□□ 1.2
SMN1-211ENST00000625245 ERC2O15083 957 aa22.56■■□□□ 1.2
SMN1-211ENST00000625245 C6orf222P0C671 652 aaPredicted RBP22.56■■□□□ 1.2
SMN1-211ENST00000625245 IRX5P78411 483 aaPredicted RBP22.56■■□□□ 1.2
SMN1-211ENST00000625245 FPGSQ05932 587 aa22.56■■□□□ 1.2
SMN1-211ENST00000625245 FAAP100Q0VG06 881 aa22.56■■□□□ 1.2
SMN1-211ENST00000625245 SPC25Q9HBM1 224 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms