RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 SMTNL1A8MU46 457 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 CDK11BP21127 795 aaKnown RBP14.86□□□□□ -0.03
AGAP3-226ENST00000622464 SNAP25P60880 206 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 NEDD1Q8NHV4 660 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 SCAF8Q9UPN6 1271 aaKnown RBP14.86□□□□□ -0.03
AGAP3-226ENST00000622464 CDC25BP30305 580 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 TPM3P06753 285 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 TPM4P67936 248 aa14.86□□□□□ -0.03
AGAP3-226ENST00000622464 SMCO2A6NFE2 343 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
AGAP3-226ENST00000622464 TNNT1P13805 278 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 APOBEC3HQ6NTF7 200 aaKnown RBP14.85□□□□□ -0.03
AGAP3-226ENST00000622464 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 BPIFA3Q9BQP9 254 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 CBX1P83916 185 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 MORC3Q14149 939 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 MTERF4Q7Z6M4 381 aaKnown RBP14.85□□□□□ -0.03
AGAP3-226ENST00000622464 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
AGAP3-226ENST00000622464 LRRC15Q8TF66 581 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 BARHL2Q9NY43 387 aa14.85□□□□□ -0.03
AGAP3-226ENST00000622464 COL11A2P13942 1736 aaPredicted RBP14.85□□□□□ -0.03
AGAP3-226ENST00000622464 CCNT1O60563 726 aaKnown RBP14.84□□□□□ -0.03
AGAP3-226ENST00000622464 PDHBP11177 359 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 PLCG2P16885 1265 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 NAA30Q147X3 362 aaPredicted RBP14.84□□□□□ -0.03
AGAP3-226ENST00000622464 MASTLQ96GX5 879 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 CCDC94Q9BW85 323 aaPredicted RBP14.84□□□□□ -0.03
AGAP3-226ENST00000622464 TMX1Q9H3N1 280 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 SLFN14P0C7P3 912 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 CRKP46108 304 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 UBE2SQ16763 222 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 CCDC96Q2M329 555 aa14.84□□□□□ -0.03
AGAP3-226ENST00000622464 TMX4Q9H1E5 349 aaPredicted RBP14.84□□□□□ -0.03
AGAP3-226ENST00000622464 DDTLA6NHG4 134 aaPredicted RBP14.83□□□□□ -0.03
AGAP3-226ENST00000622464 GDF11O95390 407 aa14.83□□□□□ -0.03
AGAP3-226ENST00000622464 PDE6BP35913 854 aa14.83□□□□□ -0.03
AGAP3-226ENST00000622464 SARSP49591 514 aaKnown RBP14.83□□□□□ -0.03
AGAP3-226ENST00000622464 MTMR4Q9NYA4 1195 aa14.83□□□□□ -0.03
AGAP3-226ENST00000622464 SERPINB13Q9UIV8 391 aa14.83□□□□□ -0.03
AGAP3-226ENST00000622464 HOOK1Q9UJC3 728 aaKnown RBP14.83□□□□□ -0.03
AGAP3-226ENST00000622464 CTNND2Q9UQB3 1225 aa14.83□□□□□ -0.03
AGAP3-226ENST00000622464 GDAQ9Y2T3 454 aa14.83□□□□□ -0.03
AGAP3-226ENST00000622464 IKBKBO14920 756 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
AGAP3-226ENST00000622464 SHMT1P34896 483 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 SLF2Q8IX21 1173 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 RGS22Q8NE09 1264 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 TEKT1Q969V4 418 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 FERMT2Q96AC1 680 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 DNAJC18Q9H819 358 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 C21orf2O43822 256 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 ECE2O60344 883 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 SFPQP23246 707 aaKnown RBP eCLIP14.83□□□□□ -0.044e-6■■■■□ 20.8
AGAP3-226ENST00000622464 CALML3P27482 149 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 ALDH1B1P30837 517 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 ADKP55263 362 aaKnown RBP14.83□□□□□ -0.04
AGAP3-226ENST00000622464 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
AGAP3-226ENST00000622464 CPLX3Q8WVH0 158 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 ANKS1AQ92625 1134 aa14.83□□□□□ -0.04
AGAP3-226ENST00000622464 SEC63Q9UGP8 760 aaKnown RBP14.83□□□□□ -0.04
AGAP3-226ENST00000622464 TEX33O43247 280 aa14.82□□□□□ -0.04
AGAP3-226ENST00000622464 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
AGAP3-226ENST00000622464 FAM163AQ96GL9 167 aaPredicted RBP14.82□□□□□ -0.04
AGAP3-226ENST00000622464 NUP88Q99567 741 aaPredicted RBP14.82□□□□□ -0.04
AGAP3-226ENST00000622464 OSBPL5Q9H0X9 879 aaPredicted RBP14.82□□□□□ -0.04
AGAP3-226ENST00000622464 ZNF287Q9HBT7 754 aa14.82□□□□□ -0.04
AGAP3-226ENST00000622464 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
AGAP3-226ENST00000622464 M0R2N6 131 aa14.82□□□□□ -0.04
AGAP3-226ENST00000622464 TDRD3Q9H7E2 651 aaKnown RBP14.82□□□□□ -0.04
AGAP3-226ENST00000622464 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.82□□□□□ -0.04
AGAP3-226ENST00000622464 V9GYY5 206 aaPredicted RBP14.82□□□□□ -0.04
AGAP3-226ENST00000622464 H0YIN7 160 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 PLSCR1O15162 318 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 RXRBP28702 533 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 CCT6AP40227 531 aaKnown RBP14.81□□□□□ -0.04
AGAP3-226ENST00000622464 STAT6P42226 847 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 GNAQP50148 359 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 GABPAQ06546 454 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 E2F4Q16254 413 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 UTP14CQ5TAP6 766 aaKnown RBP14.81□□□□□ -0.04
AGAP3-226ENST00000622464 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 FAM177A1Q8N128 213 aaPredicted RBP14.81□□□□□ -0.04
AGAP3-226ENST00000622464 TBCKQ8TEA7 893 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.81□□□□□ -0.04
AGAP3-226ENST00000622464 SCN9AQ15858 1988 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 TECP42680 631 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 RRAGBQ5VZM2 374 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 PDXDC2PQ6P474 469 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 HPS3Q969F9 1004 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 LTBP1Q14766 1721 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 TRIM49BA6NDI0 452 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 USP17L10C9JJH3 530 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 DTHD1Q6ZMT9 781 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 SLX4Q8IY92 1834 aa14.81□□□□□ -0.04
AGAP3-226ENST00000622464 PPP1R11O60927 126 aaPredicted RBP14.8□□□□□ -0.04
AGAP3-226ENST00000622464 TDP2O95551 362 aa14.8□□□□□ -0.04
AGAP3-226ENST00000622464 TNNI2P48788 182 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms