RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 STXBP3O00186 592 aa8.79□□□□□ -1
VPS11-209ENST00000622309 ENC1O14682 589 aa8.79□□□□□ -1
VPS11-209ENST00000622309 SPTLC2O15270 562 aa8.79□□□□□ -1
VPS11-209ENST00000622309 DNAJC8O75937 253 aaPredicted RBP8.79□□□□□ -1
VPS11-209ENST00000622309 CD151P48509 253 aa8.79□□□□□ -1
VPS11-209ENST00000622309 APLP1P51693 650 aa8.79□□□□□ -1
VPS11-209ENST00000622309 CCDC178Q5BJE1 867 aa8.79□□□□□ -1
VPS11-209ENST00000622309 ZFAND2BQ8WV99 257 aa8.79□□□□□ -1
VPS11-209ENST00000622309 TEKT4Q8WW24 435 aa8.79□□□□□ -1
VPS11-209ENST00000622309 IQCGQ9H095 443 aaKnown RBP8.79□□□□□ -1
VPS11-209ENST00000622309 ALDH8A1Q9H2A2 487 aaPredicted RBP8.79□□□□□ -1
VPS11-209ENST00000622309 USP6P35125 1406 aa8.79□□□□□ -1
VPS11-209ENST00000622309 MYBL1P10243 752 aa8.79□□□□□ -1
VPS11-209ENST00000622309 SCNN1BP51168 640 aa8.79□□□□□ -1
VPS11-209ENST00000622309 CFAP58Q5T655 872 aa8.79□□□□□ -1
VPS11-209ENST00000622309 TRAPPC11Q7Z392 1133 aa8.79□□□□□ -1
VPS11-209ENST00000622309 ARFGAP2Q8N6H7 521 aa8.79□□□□□ -1
VPS11-209ENST00000622309 DYDC1Q8WWB3 177 aa8.79□□□□□ -1
VPS11-209ENST00000622309 NFE2L3Q9Y4A8 694 aa8.79□□□□□ -1
VPS11-209ENST00000622309 TECPR2O15040 1411 aa8.79□□□□□ -1
VPS11-209ENST00000622309 RBM47A0AV96 593 aaKnown RBP8.79□□□□□ -1
VPS11-209ENST00000622309 PLEKHG3A1L390 1219 aa8.79□□□□□ -1
VPS11-209ENST00000622309 GMNCA6NCL1 334 aa8.79□□□□□ -1
VPS11-209ENST00000622309 SYKP43405 635 aa8.79□□□□□ -1
VPS11-209ENST00000622309 RBL2Q08999 1139 aa8.79□□□□□ -1
VPS11-209ENST00000622309 MAP4K1Q92918 833 aa8.79□□□□□ -1
VPS11-209ENST00000622309 YIPF2Q9BWQ6 316 aa8.79□□□□□ -1
VPS11-209ENST00000622309 METTL14Q9HCE5 456 aaKnown RBP8.79□□□□□ -1
VPS11-209ENST00000622309 RABL2AQ9UBK7 228 aaPredicted RBP8.79□□□□□ -1
VPS11-209ENST00000622309 HDAC6Q9UBN7 1215 aa8.79□□□□□ -1
VPS11-209ENST00000622309 MAP3K5Q99683 1374 aa8.79□□□□□ -1
VPS11-209ENST00000622309 A6NHS1 94 aa8.78□□□□□ -1
VPS11-209ENST00000622309 EIF4E1BA6NMX2 242 aaKnown RBP8.78□□□□□ -1
VPS11-209ENST00000622309 SRGAP2O75044 1071 aa8.78□□□□□ -1
VPS11-209ENST00000622309 CSPG5O95196 566 aa8.78□□□□□ -1
VPS11-209ENST00000622309 KRT14P02533 472 aa8.78□□□□□ -1
VPS11-209ENST00000622309 PFKFB1P16118 471 aa8.78□□□□□ -1
VPS11-209ENST00000622309 EPHB4P54760 987 aa8.78□□□□□ -1
VPS11-209ENST00000622309 APBA1Q02410 837 aa8.78□□□□□ -1
VPS11-209ENST00000622309 COL9A3Q14050 684 aaPredicted RBP8.78□□□□□ -1
VPS11-209ENST00000622309 SYNE3Q6ZMZ3 975 aa8.78□□□□□ -1
VPS11-209ENST00000622309 FNBP4Q8N3X1 1017 aaPredicted RBP8.78□□□□□ -1
VPS11-209ENST00000622309 LINC00301Q8NCQ3 95 aa8.78□□□□□ -1
VPS11-209ENST00000622309 MORC4Q8TE76 937 aa8.78□□□□□ -1
VPS11-209ENST00000622309 LLPHQ9BRT6 129 aaKnown RBP8.78□□□□□ -1
VPS11-209ENST00000622309 ADAMTS2O95450 1211 aa8.78□□□□□ -1
VPS11-209ENST00000622309 DYNC1I2Q13409 638 aaKnown RBP8.78□□□□□ -1
VPS11-209ENST00000622309 LACTB2Q53H82 288 aaPredicted RBP8.78□□□□□ -1
VPS11-209ENST00000622309 WDR78Q5VTH9 848 aa8.78□□□□□ -1
VPS11-209ENST00000622309 TMTC1Q8IUR5 882 aa8.78□□□□□ -1
VPS11-209ENST00000622309 SYCP3Q8IZU3 236 aa8.78□□□□□ -1
VPS11-209ENST00000622309 SEC62Q99442 399 aaKnown RBP8.78□□□□□ -1
VPS11-209ENST00000622309 TSPYL4Q9UJ04 414 aa8.78□□□□□ -1
VPS11-209ENST00000622309 TUBE1Q9UJT0 475 aa8.78□□□□□ -1
VPS11-209ENST00000622309 ATRNO75882 1429 aa8.78□□□□□ -1
VPS11-209ENST00000622309 PTPDC1A2A3K4 754 aa8.78□□□□□ -1
VPS11-209ENST00000622309 SRRM3A6NNA2 597 aaPredicted RBP8.78□□□□□ -1
VPS11-209ENST00000622309 ABL1P00519 1130 aa8.78□□□□□ -1
VPS11-209ENST00000622309 HPDP32754 393 aaPredicted RBP8.78□□□□□ -1
VPS11-209ENST00000622309 ZBED6P86452 979 aa8.78□□□□□ -1
VPS11-209ENST00000622309 SFSWAPQ12872 951 aaKnown RBP8.78□□□□□ -1
VPS11-209ENST00000622309 PNOCQ13519 176 aa8.78□□□□□ -1
VPS11-209ENST00000622309 KRT32Q14532 448 aa8.78□□□□□ -1
VPS11-209ENST00000622309 MTHFSDQ2M296 383 aaKnown RBP8.78□□□□□ -1
VPS11-209ENST00000622309 SPRED3Q2MJR0 410 aa8.78□□□□□ -1
VPS11-209ENST00000622309 PPP1R15BQ5SWA1 713 aa8.78□□□□□ -1
VPS11-209ENST00000622309 EMBQ6PCB8 327 aa8.78□□□□□ -1
VPS11-209ENST00000622309 G2E3Q7L622 706 aa8.78□□□□□ -1
VPS11-209ENST00000622309 UBE3BQ7Z3V4 1068 aa8.78□□□□□ -1
VPS11-209ENST00000622309 CNGA4Q8IV77 575 aa8.78□□□□□ -1
VPS11-209ENST00000622309 TEX9Q8N6V9 391 aa8.78□□□□□ -1
VPS11-209ENST00000622309 SEC16BQ96JE7 1060 aa8.78□□□□□ -1
VPS11-209ENST00000622309 C8orf76Q96K31 380 aa8.78□□□□□ -1
VPS11-209ENST00000622309 ZIM3Q96PE6 472 aa8.78□□□□□ -1
VPS11-209ENST00000622309 DNAAF2Q9NVR5 837 aaKnown RBP8.78□□□□□ -1
VPS11-209ENST00000622309 SLC5A4Q9NY91 659 aa8.78□□□□□ -1
VPS11-209ENST00000622309 A0A1B0GVG6 124 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 HIP1O00291 1037 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 POLE2P56282 527 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 RIPK1Q13546 671 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 ESCO1Q5FWF5 840 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 GKAP1Q5VSY0 366 aaPredicted RBP8.77□□□□□ -1.01
VPS11-209ENST00000622309 PPP4R3AQ6IN85 833 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 CPLX4Q7Z7G2 160 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 HELBQ8NG08 1087 aaPredicted RBP8.77□□□□□ -1.01
VPS11-209ENST00000622309 JAKMIP2Q96AA8 810 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 EYA1Q99502 592 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 DACH1Q9UI36 760 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 C2CD2Q9Y426 696 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 CLIC4Q9Y696 253 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1.01
VPS11-209ENST00000622309 ATP6V1G1O75348 118 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 UPP2O95045 317 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 YEATS4O95619 227 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 UBTFL1P0CB47 393 aaPredicted RBP8.77□□□□□ -1.01
VPS11-209ENST00000622309 GHRP10912 638 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 CMA1P23946 247 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 CNGA1P29973 690 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 C2orf54Q08AI8 447 aa8.77□□□□□ -1.01
VPS11-209ENST00000622309 TAF11Q15544 211 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms