RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 INCENPQ9NQS7 918 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 TAB2Q9NYJ8 693 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 SSH2Q76I76 1423 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 CLTCQ00610 1675 aaKnown RBP10.29□□□□□ -0.76
GGA3-223ENST00000621870 CEP152O94986 1710 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 EIF2AK2P19525 551 aaKnown RBP10.29□□□□□ -0.76
GGA3-223ENST00000621870 NR5A1Q13285 461 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 ZNF827Q17R98 1081 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 LRCH2Q5VUJ6 765 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 MCTP2Q6DN12 878 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 TEKT3Q9BXF9 490 aa10.29□□□□□ -0.76
GGA3-223ENST00000621870 ADD3Q9UEY8 706 aaKnown RBP10.29□□□□□ -0.76
GGA3-223ENST00000621870 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 SEPT2Q15019 361 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
GGA3-223ENST00000621870 BARGINQ6ZT62 677 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 ZFP91Q96JP5 570 aaPredicted RBP10.28□□□□□ -0.76
GGA3-223ENST00000621870 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 STK24Q9Y6E0 443 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 SYNRGQ9UMZ2 1314 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 CPDO75976 1380 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 CALUO43852 315 aaPredicted RBP10.28□□□□□ -0.76
GGA3-223ENST00000621870 PFKFB1P16118 471 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 SCARF1Q14162 830 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 TMEM179Q6ZVK1 233 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 CLSTN2Q9H4D0 955 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 CAMTA2O94983 1202 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 CDC25AP30304 524 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 POLGP54098 1239 aaPredicted RBP10.28□□□□□ -0.76
GGA3-223ENST00000621870 TERF1P54274 439 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 CNGA4Q8IV77 575 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 ZBTB8OSQ8IWT0 167 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 AIFM3Q96NN9 605 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 ARHGEF40Q8TER5 1519 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 MYO3BQ8WXR4 1341 aa10.28□□□□□ -0.76
GGA3-223ENST00000621870 TNFAIP3P21580 790 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 TMOD1P28289 359 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 PNOCQ13519 176 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 ADALQ6DHV7 355 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 HACE1Q8IYU2 909 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 TBCKQ8TEA7 893 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 CCDC127Q96BQ5 260 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 ADPGKQ9BRR6 497 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 SELENOOQ9BVL4 669 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 WDR70Q9NW82 654 aa10.27□□□□□ -0.76
GGA3-223ENST00000621870 SPHKAPQ2M3C7 1700 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
GGA3-223ENST00000621870 HOXA13P31271 388 aaPredicted RBP10.27□□□□□ -0.77
GGA3-223ENST00000621870 LRMPQ12912 555 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
GGA3-223ENST00000621870 SYDE2Q5VT97 1194 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 GALNT17Q6IS24 598 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.27□□□□□ -0.77
GGA3-223ENST00000621870 RNF34Q969K3 372 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 SRRTQ9BXP5 876 aaKnown RBP10.27□□□□□ -0.77
GGA3-223ENST00000621870 NLRC4Q9NPP4 1024 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 FSD2A1L4K1 749 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 PRPHP41219 470 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 ARHGAP44Q17R89 818 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 PROCA1Q8NCQ7 364 aaPredicted RBP10.27□□□□□ -0.77
GGA3-223ENST00000621870 TBC1D16Q8TBP0 767 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 AP5M1Q9H0R1 490 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 DCP1AQ9NPI6 582 aaPredicted RBP10.27□□□□□ -0.77
GGA3-223ENST00000621870 KIAA1024Q9UPX6 916 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 UNC13BO14795 1591 aa10.27□□□□□ -0.77
GGA3-223ENST00000621870 AKR1B15C9JRZ8 316 aaPredicted RBP10.26□□□□□ -0.77
GGA3-223ENST00000621870 IFNAR1P17181 557 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 LIG4P49917 911 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 SLC15A2Q16348 729 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 GSTA5Q7RTV2 222 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 CCDC117Q8IWD4 279 aaPredicted RBP10.26□□□□□ -0.77
GGA3-223ENST00000621870 SLFN12Q8IYM2 578 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 LMBR1Q8WVP7 490 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 GJA10Q969M2 543 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 ZNF577Q9BSK1 485 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 NACA2Q9H009 215 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 TECPR2O15040 1411 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 FANCCQ00597 558 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 NSUN7Q8NE18 718 aaKnown RBP10.26□□□□□ -0.77
GGA3-223ENST00000621870 NELFBQ8WX92 580 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 CAPZA3Q96KX2 299 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 ANO3Q9BYT9 981 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 ST7Q9NRC1 585 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 FAM207AQ9NSI2 230 aaPredicted RBP10.26□□□□□ -0.77
GGA3-223ENST00000621870 NRBP2Q9NSY0 501 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 SCAF8Q9UPN6 1271 aaKnown RBP10.26□□□□□ -0.77
GGA3-223ENST00000621870 SPOPO43791 374 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 FOXO4P98177 505 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 CDC37Q16543 378 aaPredicted RBP10.26□□□□□ -0.77
GGA3-223ENST00000621870 UBE2SQ16763 222 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 ODR4Q5SWX8 454 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 CCDC122Q5T0U0 273 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 DGKHQ86XP1 1220 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 SLC7A3Q8WY07 619 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 KIFAP3Q92845 792 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 IWS1Q96ST2 819 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms