RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 BTNL9Q6UXG8 535 aa12.3□□□□□ -0.44
CPNE3-212ENST00000621783 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
CPNE3-212ENST00000621783 ZNF280CQ8ND82 737 aa12.3□□□□□ -0.44
CPNE3-212ENST00000621783 MTMR8Q96EF0 704 aa12.3□□□□□ -0.44
CPNE3-212ENST00000621783 JMJD4Q9H9V9 463 aa12.3□□□□□ -0.44
CPNE3-212ENST00000621783 CSADQ9Y600 493 aa12.3□□□□□ -0.44
CPNE3-212ENST00000621783 UTRNP46939 3433 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 LOC285556D6RIA3 1793 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 STXBP3O00186 592 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 WDR46O15213 610 aaKnown RBP12.29□□□□□ -0.44
CPNE3-212ENST00000621783 MCM4P33991 863 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 DNM1Q05193 864 aaKnown RBP12.29□□□□□ -0.44
CPNE3-212ENST00000621783 SPP2Q13103 211 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
CPNE3-212ENST00000621783 DGKZQ13574 1117 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 SAFBQ15424 915 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPNE3-212ENST00000621783 MAP3K11Q16584 847 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 MOB2Q70IA6 237 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 DIS3L2Q8IYB7 885 aaKnown RBP12.29□□□□□ -0.44
CPNE3-212ENST00000621783 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 LPAR1Q92633 364 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 PHF20Q9BVI0 1012 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 SH3GLB2Q9NR46 395 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 BARHL2Q9NY43 387 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 ZHX2Q9Y6X8 837 aa12.29□□□□□ -0.44
CPNE3-212ENST00000621783 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 TRIM75PA6NK02 468 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 hCG_1984214I3L0E3 225 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 KRT2P35908 639 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 STAT2P52630 851 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 USP14P54578 494 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 BACE1P56817 501 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 NLRP5P59047 1200 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.44
CPNE3-212ENST00000621783 GNL2Q13823 731 aaKnown RBP12.28□□□□□ -0.44
CPNE3-212ENST00000621783 NPY5RQ15761 445 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-212ENST00000621783 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 BRAPQ7Z569 592 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 ANKRD13AQ8IZ07 590 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 ZNF713Q8N859 430 aaPredicted RBP12.28□□□□□ -0.44
CPNE3-212ENST00000621783 C12orf42Q96LP6 360 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 ELP3Q9H9T3 547 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 CNPY2Q9Y2B0 182 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 PTPRFP10586 1907 aa12.28□□□□□ -0.44
CPNE3-212ENST00000621783 PARP14Q460N5 1801 aa12.27□□□□□ -0.44
CPNE3-212ENST00000621783 PNMA6FA0A0J9YX94 578 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 ZBTB5O15062 677 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 PLA2G6O60733 806 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 PPP1R11O60927 126 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-212ENST00000621783 VCAM1P19320 739 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 U2AF2P26368 475 aaKnown RBP eCLIP12.27□□□□□ -0.45
CPNE3-212ENST00000621783 NAPAP54920 295 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 QRICH1Q2TAL8 776 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 PPP1R18Q6NYC8 613 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 FAM160B2Q86V87 743 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-212ENST00000621783 OXER1Q8TDS5 423 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 FOXP1Q9H334 677 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-212ENST00000621783 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 BRMS1Q9HCU9 246 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
CPNE3-212ENST00000621783 PRR12Q9ULL5 1215 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
CPNE3-212ENST00000621783 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 BTBD18B2RXH4 712 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 FIBPO43427 364 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 NCLP19338 710 aaKnown RBP12.26□□□□□ -0.45
CPNE3-212ENST00000621783 CALML3P27482 149 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 HMGCS2P54868 508 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 SNAP25P60880 206 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 KRT85P78386 507 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 NR5A1Q13285 461 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 MYSM1Q5VVJ2 828 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 DAGLBQ8NCG7 672 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 CCDC12Q8WUD4 166 aaPredicted RBP12.26□□□□□ -0.45
CPNE3-212ENST00000621783 CHURC1Q8WUH1 139 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
CPNE3-212ENST00000621783 GDPD2Q9HCC8 539 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 FBXO28Q9NVF7 368 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 FEM1BQ9UK73 627 aa12.26□□□□□ -0.45
CPNE3-212ENST00000621783 BAZ2BQ9UIF8 2168 aaKnown RBP12.26□□□□□ -0.45
CPNE3-212ENST00000621783 ESYT2A0FGR8 921 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 ADAMTS3O15072 1205 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 CAPN15O75808 1086 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 PPATQ06203 517 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 NBR1Q14596 966 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 SH3D19Q5HYK7 790 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 LDLRAD1Q5T700 205 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 ERO1BQ86YB8 467 aa12.25□□□□□ -0.45
CPNE3-212ENST00000621783 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms