RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-215ENST00000621534 PRKG1Q13976 671 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 TTLL12Q14166 644 aaPredicted RBP17.5■□□□□ 0.39
PSMD13-215ENST00000621534 KRT40Q6A162 431 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 TTBK2Q6IQ55 1244 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 KCTD1Q719H9 257 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 DCAF4Q8WV16 495 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 ZKSCAN4Q969J2 545 aaPredicted RBP17.5■□□□□ 0.39
PSMD13-215ENST00000621534 NUP88Q99567 741 aaPredicted RBP17.5■□□□□ 0.39
PSMD13-215ENST00000621534 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 UBA5Q9GZZ9 404 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 SYNPO2Q9UMS6 1093 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 TMX2Q9Y320 296 aa17.5■□□□□ 0.39
PSMD13-215ENST00000621534 SCYL3Q8IZE3 742 aa17.49■□□□□ 0.39
PSMD13-215ENST00000621534 TCHHQ07283 1943 aa17.49■□□□□ 0.39
PSMD13-215ENST00000621534 USP2O75604 605 aaPredicted RBP17.49■□□□□ 0.39
PSMD13-215ENST00000621534 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
PSMD13-215ENST00000621534 FAM173BQ6P4H8 233 aa17.49■□□□□ 0.39
PSMD13-215ENST00000621534 SPICE1Q8N0Z3 855 aa17.49■□□□□ 0.39
PSMD13-215ENST00000621534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.392e-13■■□□□ 13.1
PSMD13-215ENST00000621534 GMCL1Q96IK5 515 aa17.49■□□□□ 0.39
PSMD13-215ENST00000621534 GINM1Q9NU53 330 aa17.49■□□□□ 0.39
PSMD13-215ENST00000621534 VPS54Q9P1Q0 977 aa17.49■□□□□ 0.39
PSMD13-215ENST00000621534 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 SCG2P13521 617 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 NF2P35240 595 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 SLC16A2P36021 539 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 SLC1A4P43007 532 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 ZYXQ15942 572 aaKnown RBP17.48■□□□□ 0.39
PSMD13-215ENST00000621534 GPATCH4Q5T3I0 446 aaKnown RBP17.48■□□□□ 0.39
PSMD13-215ENST00000621534 MCTP1Q6DN14 999 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 GBP4Q96PP9 640 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 RIOX1Q9H6W3 641 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 ISY1Q9ULR0 285 aaKnown RBP17.48■□□□□ 0.39
PSMD13-215ENST00000621534 KCNJ14Q9UNX9 436 aa17.48■□□□□ 0.39
PSMD13-215ENST00000621534 SMARCA1P28370 1054 aa17.47■□□□□ 0.39
PSMD13-215ENST00000621534 MCM4P33991 863 aa17.47■□□□□ 0.39
PSMD13-215ENST00000621534 NOL9Q5SY16 702 aaKnown RBP17.47■□□□□ 0.39
PSMD13-215ENST00000621534 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
PSMD13-215ENST00000621534 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
PSMD13-215ENST00000621534 PIGSQ96S52 555 aa17.47■□□□□ 0.39
PSMD13-215ENST00000621534 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
PSMD13-215ENST00000621534 VAT1LQ9HCJ6 419 aa17.47■□□□□ 0.39
PSMD13-215ENST00000621534 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
PSMD13-215ENST00000621534 RBM27Q9P2N5 1060 aaKnown RBP17.47■□□□□ 0.39
PSMD13-215ENST00000621534 PTPRAP18433 802 aa17.46■□□□□ 0.39
PSMD13-215ENST00000621534 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
PSMD13-215ENST00000621534 TRIM29Q14134 588 aa17.46■□□□□ 0.39
PSMD13-215ENST00000621534 CTU1Q7Z7A3 348 aaKnown RBP17.46■□□□□ 0.39
PSMD13-215ENST00000621534 ADGRF4Q8IZF3 695 aa17.46■□□□□ 0.39
PSMD13-215ENST00000621534 SH2D4AQ9H788 454 aa17.46■□□□□ 0.39
PSMD13-215ENST00000621534 TNRC18O15417 2968 aaPredicted RBP17.46■□□□□ 0.39
PSMD13-215ENST00000621534 MMP1P03956 469 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 BMP3P12645 472 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 SOX10P56693 466 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
PSMD13-215ENST00000621534 WWC2Q6AWC2 1192 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
PSMD13-215ENST00000621534 HOMER1Q86YM7 354 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 RRP36Q96EU6 259 aaKnown RBP17.45■□□□□ 0.38
PSMD13-215ENST00000621534 FEZ1Q99689 392 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 JMJD4Q9H9V9 463 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 SNCAIPQ9Y6H5 919 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 USP17L10C9JJH3 530 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 TBC1D8O95759 1140 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 VGLL4Q14135 290 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 NPY5RQ15761 445 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
PSMD13-215ENST00000621534 CNPY2Q9Y2B0 182 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 ATP6V1DQ9Y5K8 247 aa17.45■□□□□ 0.38
PSMD13-215ENST00000621534 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 STXBP3O00186 592 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 MTMR2Q13614 643 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 ARMC9Q7Z3E5 817 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 HEATR3Q7Z4Q2 680 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 OXER1Q8TDS5 423 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 MTMR8Q96EF0 704 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 WDR18Q9BV38 432 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 KIAA1683Q9H0B3 1180 aa17.44■□□□□ 0.38
PSMD13-215ENST00000621534 ADAMTS3O15072 1205 aa17.43■□□□□ 0.38
PSMD13-215ENST00000621534 PPP1R12BO60237 982 aaPredicted RBP17.43■□□□□ 0.38
PSMD13-215ENST00000621534 TM4SF4P48230 202 aa17.43■□□□□ 0.38
PSMD13-215ENST00000621534 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
PSMD13-215ENST00000621534 NBR1Q14596 966 aa17.43■□□□□ 0.38
PSMD13-215ENST00000621534 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
PSMD13-215ENST00000621534 ZNF296Q8WUU4 475 aaPredicted RBP17.43■□□□□ 0.38
PSMD13-215ENST00000621534 GDPD2Q9HCC8 539 aa17.43■□□□□ 0.38
PSMD13-215ENST00000621534 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
PSMD13-215ENST00000621534 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
PSMD13-215ENST00000621534 SLC34A2O95436 690 aa17.42■□□□□ 0.38
PSMD13-215ENST00000621534 XBP1P17861 261 aa17.42■□□□□ 0.38
PSMD13-215ENST00000621534 SPP2Q13103 211 aa17.42■□□□□ 0.38
PSMD13-215ENST00000621534 SYDE2Q5VT97 1194 aa17.42■□□□□ 0.38
PSMD13-215ENST00000621534 BTNL9Q6UXG8 535 aa17.42■□□□□ 0.38
PSMD13-215ENST00000621534 BARHL2Q9NY43 387 aa17.42■□□□□ 0.38
PSMD13-215ENST00000621534 ZHX2Q9Y6X8 837 aa17.42■□□□□ 0.38
PSMD13-215ENST00000621534 PTPRFP10586 1907 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms