RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 V9GY48 417 aaPredicted RBP9.32□□□□□ -0.92
CPNE3-209ENST00000620393 SIPA1L1O43166 1804 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 PTPDC1A2A3K4 754 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 SPDYE5A6NIY4 337 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 CXCL11O14625 94 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 RAD21O60216 631 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 PLA2G6O60733 806 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 TOMM70O94826 608 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
CPNE3-209ENST00000620393 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
CPNE3-209ENST00000620393 CCDC96Q2M329 555 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 SLC35G1Q2M3R5 365 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 LARP1BQ659C4 914 aaKnown RBP9.31□□□□□ -0.92
CPNE3-209ENST00000620393 TTBK2Q6IQ55 1244 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 BTNL9Q6UXG8 535 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 KCTD1Q719H9 257 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 TRIM22Q8IYM9 498 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 LPAR1Q92633 364 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 PHKBQ93100 1093 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 FEZ1Q99689 392 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 SPZ1Q9BXG8 430 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 SLC26A6Q9BXS9 759 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 RNF26Q9BY78 433 aaPredicted RBP9.31□□□□□ -0.92
CPNE3-209ENST00000620393 UBA5Q9GZZ9 404 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 EMILIN3Q9NT22 766 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 LAMB1P07942 1786 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 FRMPD2Q68DX3 1309 aaPredicted RBP9.31□□□□□ -0.92
CPNE3-209ENST00000620393 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
CPNE3-209ENST00000620393 TRIM75PA6NK02 468 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 TMEM232C9JQI7 657 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 CYTH3O43739 400 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 PPFIA3O75145 1194 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 DEXIO95424 95 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 PDCP20941 246 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 PPIL2Q13356 520 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 MTMR2Q13614 643 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 ZYXQ15942 572 aaKnown RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 RASGRP2Q7LDG7 609 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 SPICE1Q8N0Z3 855 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 PDCD7Q8N8D1 485 aaKnown RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 RGS22Q8NE09 1264 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 CHURC1Q8WUH1 139 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 WASF1Q92558 559 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 C12orf42Q96LP6 360 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 NUP88Q99567 741 aaPredicted RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 VAT1LQ9HCJ6 419 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
CPNE3-209ENST00000620393 KCNH4Q9UQ05 1017 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 STK36Q9NRP7 1315 aa9.3□□□□□ -0.92
CPNE3-209ENST00000620393 IRF6O14896 467 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 SYT1P21579 422 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 SLC16A2P36021 539 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 NUCB2P80303 420 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 FSTL1Q12841 308 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 PKN1Q16512 942 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 FAM83BQ5T0W9 1011 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 FAM160B2Q86V87 743 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 ADGRF4Q8IZF3 695 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 OPTNQ96CV9 577 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 MTMR8Q96EF0 704 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 CPVLQ9H3G5 476 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 JMJD4Q9H9V9 463 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 TMOD4Q9NZQ9 345 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 CHMP5Q9NZZ3 219 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 FEM1BQ9UK73 627 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 POLR2AP24928 1970 aaKnown RBP9.29□□□□□ -0.92
CPNE3-209ENST00000620393 CNTNAP5Q8WYK1 1306 aa9.29□□□□□ -0.92
CPNE3-209ENST00000620393 A0A0G2JLL6 359 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-209ENST00000620393 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 hCG_1642624A0A1W2PR95 340 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 STX6O43752 255 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 VCAM1P19320 739 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 GJA5P36382 358 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 HMGCS2P54868 508 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 HUNKP57058 714 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 PFKFB3Q16875 520 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-209ENST00000620393 SYDE2Q5VT97 1194 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 PRRT2Q7Z6L0 340 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-209ENST00000620393 PRPF38AQ8NAV1 312 aaKnown RBP9.28□□□□□ -0.92
CPNE3-209ENST00000620393 FBXO18Q8NFZ0 1043 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 RRP36Q96EU6 259 aaKnown RBP9.28□□□□□ -0.92
CPNE3-209ENST00000620393 WNK4Q96J92 1243 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 PIGSQ96S52 555 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 ALG1Q9BT22 464 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 RPAP3Q9H6T3 665 aaPredicted RBP9.28□□□□□ -0.92
CPNE3-209ENST00000620393 PRR12Q9ULL5 1215 aa9.28□□□□□ -0.92
CPNE3-209ENST00000620393 ISY1Q9ULR0 285 aaKnown RBP9.28□□□□□ -0.92
CPNE3-209ENST00000620393 USP17L15C9J2P7 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 USP17L13C9JLJ4 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 USP17L11C9JVI0 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 USP17L18D6R9N7 530 aa9.27□□□□□ -0.93
CPNE3-209ENST00000620393 USP17L22D6RA61 530 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms