RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 ERLIN1O75477 346 aa18.04■□□□□ 0.48
DKC1-213ENST00000620277 LETM2Q2VYF4 491 aa18.04■□□□□ 0.48
DKC1-213ENST00000620277 TMTC3Q6ZXV5 915 aa18.04■□□□□ 0.48
DKC1-213ENST00000620277 KANSL2Q9H9L4 492 aa18.04■□□□□ 0.48
DKC1-213ENST00000620277 CCDC194A0A1B0GVG4 234 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 PRPF3O43395 683 aaKnown RBP18.03■□□□□ 0.48
DKC1-213ENST00000620277 FCER1AP12319 257 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 NAP1L1P55209 391 aaKnown RBP18.03■□□□□ 0.48
DKC1-213ENST00000620277 TXNRD3Q86VQ6 643 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 TMTC1Q8IUR5 882 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 ANKRD18AQ8IVF6 992 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 ZNF512BQ96KM6 892 aaPredicted RBP18.03■□□□□ 0.48
DKC1-213ENST00000620277 RIOK1Q9BRS2 568 aaKnown RBP18.03■□□□□ 0.48
DKC1-213ENST00000620277 FAM204AQ9H8W3 233 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 PBX1P40424 430 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 MECOMQ03112 1051 aa18.03■□□□□ 0.48
DKC1-213ENST00000620277 EZH2Q15910 746 aaKnown RBP18.03■□□□□ 0.48
DKC1-213ENST00000620277 FAM207AQ9NSI2 230 aaPredicted RBP18.03■□□□□ 0.48
DKC1-213ENST00000620277 COL5A2P05997 1499 aaPredicted RBP18.02■□□□□ 0.48
DKC1-213ENST00000620277 RAD21O60216 631 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 MTIF2P46199 727 aaKnown RBP18.02■□□□□ 0.48
DKC1-213ENST00000620277 DYMQ7RTS9 669 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 SH3RF1Q7Z6J0 888 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 GJA10Q969M2 543 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 FERMT2Q96AC1 680 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 L1RE1Q9UN81 338 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 PHRF1Q9P1Y6 1649 aaKnown RBP18.02■□□□□ 0.48
DKC1-213ENST00000620277 RTL9Q8NET4 1388 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 TBC1D8BQ0IIM8 1120 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 BRD3Q15059 726 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 DIXDC1Q155Q3 683 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 IRF2BP1Q8IU81 584 aa18.02■□□□□ 0.48
DKC1-213ENST00000620277 MAGEC2Q9UBF1 373 aaPredicted RBP18.02■□□□□ 0.48
DKC1-213ENST00000620277 FEZ2Q9UHY8 353 aaPredicted RBP18.02■□□□□ 0.48
DKC1-213ENST00000620277 TTF2Q9UNY4 1162 aaKnown RBP18.02■□□□□ 0.48
DKC1-213ENST00000620277 ZNF335Q9H4Z2 1342 aaPredicted RBP18.02■□□□□ 0.47
DKC1-213ENST00000620277 NUTM2BA6NNL0 878 aaPredicted RBP18.02■□□□□ 0.47
DKC1-213ENST00000620277 NUTM2EB1AL46 878 aaPredicted RBP18.02■□□□□ 0.47
DKC1-213ENST00000620277 MYBL2P10244 700 aa18.02■□□□□ 0.47
DKC1-213ENST00000620277 ATP2C1P98194 919 aaPredicted RBP18.02■□□□□ 0.47
DKC1-213ENST00000620277 PDXDC2PQ6P474 469 aa18.02■□□□□ 0.47
DKC1-213ENST00000620277 CSGALNACT2Q8N6G5 542 aa18.02■□□□□ 0.47
DKC1-213ENST00000620277 SLC39A2Q9NP94 309 aa18.02■□□□□ 0.47
DKC1-213ENST00000620277 ITPK1Q13572 414 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 EHD4Q9H223 541 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 KAT14Q9H8E8 782 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 ADAMTS7Q9UKP4 1686 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 MYO1CO00159 1063 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 FAM182BQ5T319 152 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 DTHD1Q6ZMT9 781 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 CCDC148Q8NFR7 591 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 OR8K1Q8NGG5 319 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 FAM84BQ96KN1 310 aaPredicted RBP18.01■□□□□ 0.47
DKC1-213ENST00000620277 CNTNAP5Q8WYK1 1306 aa18.01■□□□□ 0.47
DKC1-213ENST00000620277 IDEP14735 1019 aa18■□□□□ 0.47
DKC1-213ENST00000620277 USP5P45974 858 aa18■□□□□ 0.47
DKC1-213ENST00000620277 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
DKC1-213ENST00000620277 ASIC1P78348 528 aa18■□□□□ 0.47
DKC1-213ENST00000620277 ARID5AQ03989 594 aa18■□□□□ 0.47
DKC1-213ENST00000620277 E2F4Q16254 413 aa18■□□□□ 0.47
DKC1-213ENST00000620277 CCDC96Q2M329 555 aa18■□□□□ 0.47
DKC1-213ENST00000620277 CCDC155Q8N6L0 562 aa18■□□□□ 0.47
DKC1-213ENST00000620277 LRRC15Q8TF66 581 aa18■□□□□ 0.47
DKC1-213ENST00000620277 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
DKC1-213ENST00000620277 GLI3P10071 1580 aa18■□□□□ 0.47
DKC1-213ENST00000620277 KIF1AQ12756 1690 aa18■□□□□ 0.47
DKC1-213ENST00000620277 IL6STP40189 918 aaPredicted RBP18■□□□□ 0.47
DKC1-213ENST00000620277 TECP42680 631 aa18■□□□□ 0.47
DKC1-213ENST00000620277 HDAC7Q8WUI4 952 aa18■□□□□ 0.47
DKC1-213ENST00000620277 BAZ2AQ9UIF9 1905 aaKnown RBP18■□□□□ 0.47
DKC1-213ENST00000620277 MYO1BO43795 1136 aa18■□□□□ 0.47
DKC1-213ENST00000620277 GTPBP6O43824 516 aaPredicted RBP18■□□□□ 0.47
DKC1-213ENST00000620277 HERVK_113P62684 666 aa18■□□□□ 0.47
DKC1-213ENST00000620277 PDE4DQ08499 809 aa18■□□□□ 0.47
DKC1-213ENST00000620277 INTS5Q6P9B9 1019 aaKnown RBP18■□□□□ 0.47
DKC1-213ENST00000620277 TICAM2Q86XR7 235 aa18■□□□□ 0.47
DKC1-213ENST00000620277 BLIDQ8IZY5 108 aa18■□□□□ 0.47
DKC1-213ENST00000620277 MB21D1Q8N884 522 aa18■□□□□ 0.47
DKC1-213ENST00000620277 JAKMIP2Q96AA8 810 aa18■□□□□ 0.47
DKC1-213ENST00000620277 MLXIPQ9HAP2 919 aa18■□□□□ 0.47
DKC1-213ENST00000620277 DCP1AQ9NPI6 582 aaPredicted RBP18■□□□□ 0.47
DKC1-213ENST00000620277 PNPLA7Q6ZV29 1317 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 MAP2K7O14733 419 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
DKC1-213ENST00000620277 LRRC41Q15345 812 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 ZNF658Q5TYW1 1059 aaPredicted RBP17.99■□□□□ 0.47
DKC1-213ENST00000620277 NAA15Q9BXJ9 866 aaKnown RBP17.99■□□□□ 0.47
DKC1-213ENST00000620277 MMRN2Q9H8L6 949 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 RWDD2AQ9UIY3 292 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 PDE2AO00408 941 aaPredicted RBP17.99■□□□□ 0.47
DKC1-213ENST00000620277 NCK2O43639 380 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 RNF40O75150 1001 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 IPO7O95373 1038 aaKnown RBP17.99■□□□□ 0.47
DKC1-213ENST00000620277 STK4Q13043 487 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 TMC4Q7Z404 712 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 TUBGCP2Q9BSJ2 902 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 UBXN6Q9BZV1 441 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 UBA5Q9GZZ9 404 aa17.99■□□□□ 0.47
DKC1-213ENST00000620277 LRWD1Q9UFC0 647 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms