RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ABCD1P33897 745 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 GCKRQ14397 625 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 C2CD5Q86YS7 1000 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 LSM14BQ9BX40 385 aaKnown RBP12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 A6NJR5 290 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 RRAGAQ7L523 313 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 DDX25Q9UHL0 483 aaKnown RBP12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
CCDC144B-208ENST00000618081 BAG6P46379 1132 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 USP21Q9UK80 565 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 K7ENM7 598 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 RNF40O75150 1001 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 XPAP23025 273 aaPredicted RBP12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 CCDC38Q502W7 563 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 SCYL2Q6P3W7 929 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 KLHL7Q8IXQ5 586 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 RASSF4Q9H2L5 321 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 Q9H521 79 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 CLGNO14967 610 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 TLR3O15455 904 aaKnown RBP12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 APBA3O96018 575 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 MAGEA1P43355 309 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 DDX27Q96GQ7 796 aaKnown RBP12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 PRKAG2Q9UGJ0 569 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 TMTC4Q5T4D3 741 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 TRIM37O94972 964 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 PARD3Q8TEW0 1356 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 THAP12O43422 761 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 FAM178BQ8IXR5 827 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 BBS5Q8N3I7 341 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 NCOA5Q9HCD5 579 aaKnown RBP12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 PANK4Q9NVE7 773 aa12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.25□□□□□ -0.45
CCDC144B-208ENST00000618081 CCDC13Q8IYE1 715 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 EXOC8Q8IYI6 725 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 RUNDC3BQ96NL0 473 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 TRAPPC8Q9Y2L5 1435 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 HEXIM1O94992 359 aaKnown RBP12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 KRT10P13645 584 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 STX2P32856 288 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 COG7P83436 770 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 TFAP4Q01664 338 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 CERKLQ49MI3 558 aaPredicted RBP12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 TRIML1Q8N9V2 468 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 MYOCDQ8IZQ8 938 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 NME8Q8N427 588 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 DDX41Q9UJV9 622 aaKnown RBP12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 IFNB1P01574 187 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 ECE1P42892 770 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 CDKL2Q92772 493 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 TMEM191BP0C7N4 346 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 KRT71Q3SY84 523 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 ZBTB9Q96C00 473 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 CCDC51Q96ER9 411 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 PPME1Q9Y570 386 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 INPP1P49441 399 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 VPS54Q9P1Q0 977 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 ORC6Q9Y5N6 252 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 ZMYM3Q14202 1370 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 PRDM1O75626 825 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 ADCY8P40145 1251 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 TFDP1Q14186 410 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 POMGNT1Q8WZA1 660 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 TEKT3Q9BXF9 490 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 ATP7AQ04656 1500 aa12.24□□□□□ -0.45
CCDC144B-208ENST00000618081 SH3BGRP55822 239 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 IFRD2Q12894 506 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 MMEL1Q495T6 779 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 FAM207AQ9NSI2 230 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 EPS15L1Q9UBC2 864 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 NFE2L3Q9Y4A8 694 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 XKR9Q5GH70 373 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 RDH13Q8NBN7 331 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 MGARPQ8TDB4 240 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 PSMB7Q99436 277 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 ATP10DQ9P241 1426 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 RNF8O76064 485 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 JADE1Q6IE81 842 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 ELMSAN1Q6PJG2 1045 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 DSCC1Q9BVC3 393 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 TAB2Q9NYJ8 693 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 FAN1Q9Y2M0 1017 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 PLEKHG3A1L390 1219 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 F8W8V4 182 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 CCNA1P78396 465 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 RAB44Q7Z6P3 723 aaPredicted RBP12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 SAR1BQ9Y6B6 198 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 ARHGEF37A1IGU5 675 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 PPARAQ07869 468 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms