RNA–Protein interactions for RNA: ENST00000617708.1

GTF2IRD2B-207, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-207ENST00000617708 SYCP1Q15431 976 aa8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 LRRC56Q8IYG6 542 aaPredicted RBP8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 KCNB2Q92953 911 aa8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 LIN37Q96GY3 246 aaPredicted RBP8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 HEXIM2Q96MH2 286 aaKnown RBP8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 GBP4Q96PP9 640 aa8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 KIF3AQ9Y496 699 aa8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 METP08581 1390 aa8.82□□□□□ -1
GTF2IRD2B-207ENST00000617708 SPATA31A6Q5VVP1 1343 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 DCCP43146 1447 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 BLMP54132 1417 aaPredicted RBP8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 NDUFB5O43674 189 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 BRINP3Q76B58 766 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 C1QL4Q86Z23 238 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 RNF214Q8ND24 703 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 CCDC74AQ96AQ1 378 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 GPN3Q9UHW5 284 aaPredicted RBP8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 ZKSCAN5Q9Y2L8 839 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 CHD2O14647 1828 aaKnown RBP8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 SETBP1Q9Y6X0 1596 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 ROBO1Q9Y6N7 1651 aa8.81□□□□□ -1
GTF2IRD2B-207ENST00000617708 KIF7Q2M1P5 1343 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 RAD50Q92878 1312 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 TULP2O00295 520 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 IGF2BP3O00425 579 aaKnown RBP eCLIP8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 ICMTO60725 284 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 LILRA6Q6PI73 481 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 PDZD3Q86UT5 571 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 SPACA3Q8IXA5 215 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 DNAJC25Q9H1X3 360 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 TMEM39AQ9NV64 488 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 CALCOCO1Q9P1Z2 691 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 CGNL1Q0VF96 1302 aa8.8□□□□□ -1
GTF2IRD2B-207ENST00000617708 H3BRB1 525 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 GLI1P08151 1106 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 NASPP49321 788 aaPredicted RBP8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 ZNF445P59923 1031 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 ERVK-24P63145 666 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 LCE5AQ5TCM9 118 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 MPZL3Q6UWV2 235 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 LCNL1Q6ZST4 164 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 SYDE1Q6ZW31 735 aaPredicted RBP8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 SIAH1Q8IUQ4 282 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 NGEFQ8N5V2 710 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 SECISBP2LQ93073 1101 aaKnown RBP8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 FAM129BQ96TA1 746 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 CHMP4AQ9BY43 222 aa8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 SLKQ9H2G2 1235 aaPredicted RBP8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 TUT1Q9H6E5 874 aaKnown RBP8.79□□□□□ -1
GTF2IRD2B-207ENST00000617708 DDIT3P35638 169 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 CLCN7P51798 805 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 MFAP1P55081 439 aaKnown RBP8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 GRM2Q14416 872 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 ZC3H12AQ5D1E8 599 aaKnown RBP8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 DTHD1Q6ZMT9 781 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 FAM214BQ7L5A3 538 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 GLYCTKQ8IVS8 523 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 TMC1Q8TDI8 760 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 LRRC59Q96AG4 307 aaKnown RBP8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 TIGD1Q96MW7 591 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 MPHOSPH9Q99550 1183 aa8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 R3HCC1Q9Y3T6 440 aaKnown RBP8.78□□□□□ -1
GTF2IRD2B-207ENST00000617708 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1
GTF2IRD2B-207ENST00000617708 SPHKAPQ2M3C7 1700 aa8.77□□□□□ -1
GTF2IRD2B-207ENST00000617708 NPC1L1Q9UHC9 1359 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 NEXMIFQ5QGS0 1516 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 GNAT3A8MTJ3 354 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 GOLGA6L22H0YM25 854 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 ZSCAN22P10073 491 aaPredicted RBP8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 ZNF772Q68DY9 489 aaPredicted RBP8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 SULF2Q8IWU5 870 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 SNX21Q969T3 373 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 KIRREL1Q96J84 757 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 PRDM10Q9NQV6 1147 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 OGFRQ9NZT2 677 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 ADGRL3Q9HAR2 1447 aa8.77□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 CLTCL1P53675 1640 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 EIF1AYO14602 144 aaKnown RBP8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 KLHL40Q2TBA0 621 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 RGL3Q3MIN7 710 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 MEX3CQ5U5Q3 659 aaKnown RBP8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 FYB2Q5VWT5 728 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 PRR23BQ6ZRT6 265 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 HIRIP3Q9BW71 556 aaPredicted RBP8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 LMCD1Q9NZU5 365 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 MST1RQ04912 1400 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 PITPNM2Q9BZ72 1349 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 AHDC1Q5TGY3 1603 aaPredicted RBP8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 ANKRD30BQ9BXX2 1392 aa8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 PTCH1Q13635 1447 aa8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 CYFIP1Q7L576 1253 aa8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 SMC5Q8IY18 1101 aa8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 CITED4Q96RK1 184 aa8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 NCANO14594 1321 aa8.75□□□□□ -1.01
GTF2IRD2B-207ENST00000617708 ROBO2Q9HCK4 1378 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms