RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 KCNJ14Q9UNX9 436 aa18.8■□□□□ 0.6
SNAP47-213ENST00000617596 WDR33Q9C0J8 1336 aaKnown RBP18.8■□□□□ 0.6
SNAP47-213ENST00000617596 CELF2O95319 508 aaKnown RBP18.79■□□□□ 0.6
SNAP47-213ENST00000617596 ANKRD13AQ8IZ07 590 aa18.79■□□□□ 0.6
SNAP47-213ENST00000617596 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
SNAP47-213ENST00000617596 KIAA1683Q9H0B3 1180 aa18.79■□□□□ 0.6
SNAP47-213ENST00000617596 JMJD4Q9H9V9 463 aa18.79■□□□□ 0.6
SNAP47-213ENST00000617596 HMGCS2P54868 508 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 BACE1P56817 501 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 KRT40Q6A162 431 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 MCTP1Q6DN14 999 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 ARMC9Q7Z3E5 817 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 FBXO18Q8NFZ0 1043 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 OTUD5Q96G74 571 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 WDR18Q9BV38 432 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 RIOX1Q9H6W3 641 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 AS3MTQ9HBK9 375 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 SYNPO2Q9UMS6 1093 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 OTOFQ9HC10 1997 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
SNAP47-213ENST00000617596 F13A1P00488 732 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 SCG2P13521 617 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 MAP3K11Q16584 847 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 PFKFB3Q16875 520 aaPredicted RBP18.78■□□□□ 0.6
SNAP47-213ENST00000617596 SKOR2Q2VWA4 1001 aaPredicted RBP18.78■□□□□ 0.6
SNAP47-213ENST00000617596 FAM173BQ6P4H8 233 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 FBXO28Q9NVF7 368 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 AFG3L2Q9Y4W6 797 aa18.78■□□□□ 0.6
SNAP47-213ENST00000617596 HEATR3Q7Z4Q2 680 aa18.77■□□□□ 0.6
SNAP47-213ENST00000617596 WASF1Q92558 559 aa18.77■□□□□ 0.6
SNAP47-213ENST00000617596 RRP36Q96EU6 259 aaKnown RBP18.77■□□□□ 0.6
SNAP47-213ENST00000617596 VCAM1P19320 739 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 WWC2Q6AWC2 1192 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 TYW1BQ6NUM6 668 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 PAPPA2Q9BXP8 1791 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 IRF6O14896 467 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 TRIM29Q14134 588 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 CST9Q5W186 159 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 MAP7D2Q96T17 732 aa18.76■□□□□ 0.59
SNAP47-213ENST00000617596 GBA2Q9HCG7 927 aaPredicted RBP18.76■□□□□ 0.59
SNAP47-213ENST00000617596 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
SNAP47-213ENST00000617596 ADAMTS3O15072 1205 aa18.75■□□□□ 0.59
SNAP47-213ENST00000617596 PPP1R11O60927 126 aaPredicted RBP18.75■□□□□ 0.59
SNAP47-213ENST00000617596 TAL1P17542 331 aaPredicted RBP18.75■□□□□ 0.59
SNAP47-213ENST00000617596 SMARCA1P28370 1054 aa18.75■□□□□ 0.59
SNAP47-213ENST00000617596 STAT2P52630 851 aa18.75■□□□□ 0.59
SNAP47-213ENST00000617596 LDLRAD1Q5T700 205 aa18.75■□□□□ 0.59
SNAP47-213ENST00000617596 SYDE2Q5VT97 1194 aa18.75■□□□□ 0.59
SNAP47-213ENST00000617596 KIFC2Q96AC6 838 aa18.75■□□□□ 0.59
SNAP47-213ENST00000617596 SEC63Q9UGP8 760 aaKnown RBP18.75■□□□□ 0.59
SNAP47-213ENST00000617596 KIF3CO14782 793 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 TANGO6Q9C0B7 1094 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 PRR12Q9ULL5 1215 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 USP14P54578 494 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 CDC37Q16543 378 aaPredicted RBP18.74■□□□□ 0.59
SNAP47-213ENST00000617596 ERO1BQ86YB8 467 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 OXER1Q8TDS5 423 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 LPAR1Q92633 364 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 COA7Q96BR5 231 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 TRIM44Q96DX7 344 aaPredicted RBP18.74■□□□□ 0.59
SNAP47-213ENST00000617596 RPAP3Q9H6T3 665 aaPredicted RBP18.74■□□□□ 0.59
SNAP47-213ENST00000617596 PHIPQ8WWQ0 1821 aa18.74■□□□□ 0.59
SNAP47-213ENST00000617596 SPDYE5A6NIY4 337 aa18.73■□□□□ 0.59
SNAP47-213ENST00000617596 MMP1P03956 469 aa18.73■□□□□ 0.59
SNAP47-213ENST00000617596 MKRN3Q13064 507 aaKnown RBP18.73■□□□□ 0.59
SNAP47-213ENST00000617596 RESTQ13127 1097 aa18.73■□□□□ 0.59
SNAP47-213ENST00000617596 QRICH1Q2TAL8 776 aa18.73■□□□□ 0.59
SNAP47-213ENST00000617596 BTNL9Q6UXG8 535 aa18.73■□□□□ 0.59
SNAP47-213ENST00000617596 RBM27Q9P2N5 1060 aaKnown RBP18.73■□□□□ 0.59
SNAP47-213ENST00000617596 BTBD18B2RXH4 712 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 STXBP3O00186 592 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 ZBTB5O15062 677 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 WDR46O15213 610 aaKnown RBP18.72■□□□□ 0.59
SNAP47-213ENST00000617596 GJA5P36382 358 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 PPATQ06203 517 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 NR5A1Q13285 461 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 C2orf69Q8N8R5 385 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 SLC10A4Q96EP9 437 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 BARHL2Q9NY43 387 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 MYH6P13533 1939 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 KIF23Q02241 960 aaPredicted RBP18.72■□□□□ 0.59
SNAP47-213ENST00000617596 DIS3L2Q8IYB7 885 aaKnown RBP18.72■□□□□ 0.59
SNAP47-213ENST00000617596 PHF20Q9BVI0 1012 aa18.72■□□□□ 0.59
SNAP47-213ENST00000617596 C19orf81C9J6K1 198 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 FLOT1O75955 427 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 XBP1P17861 261 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 NLRP5P59047 1200 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 NPY5RQ15761 445 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 TREML2Q5T2D2 321 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 CCDC174Q6PII3 467 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 TMOD4Q9NZQ9 345 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 FEM1BQ9UK73 627 aa18.71■□□□□ 0.59
SNAP47-213ENST00000617596 BAG4O95429 457 aaKnown RBP18.7■□□□□ 0.58
SNAP47-213ENST00000617596 NAPAP54920 295 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 DNM1Q05193 864 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms