RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MYADML2A6NDP7 307 aa21.22■□□□□ 0.99
TRAPPC3-209ENST00000616395 APBB1O00213 710 aa21.22■□□□□ 0.99
TRAPPC3-209ENST00000616395 POLR3DP05423 398 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC3-209ENST00000616395 IRX5P78411 483 aaPredicted RBP21.22■□□□□ 0.99
TRAPPC3-209ENST00000616395 KCTD2Q14681 263 aa21.22■□□□□ 0.99
TRAPPC3-209ENST00000616395 GLT1D1Q96MS3 346 aa21.22■□□□□ 0.99
TRAPPC3-209ENST00000616395 TCF20Q9UGU0 1960 aaKnown RBP21.21■□□□□ 0.99
TRAPPC3-209ENST00000616395 ELP1O95163 1332 aa21.21■□□□□ 0.99
TRAPPC3-209ENST00000616395 AAK1Q2M2I8 961 aa21.21■□□□□ 0.99
TRAPPC3-209ENST00000616395 CLEC10AQ8IUN9 316 aa21.21■□□□□ 0.99
TRAPPC3-209ENST00000616395 HERVK_113Q902F9 699 aa21.21■□□□□ 0.99
TRAPPC3-209ENST00000616395 FAM184BQ9ULE4 1060 aa21.21■□□□□ 0.99
TRAPPC3-209ENST00000616395 RIOX2Q8IUF8 465 aa21.2■□□□□ 0.98
TRAPPC3-209ENST00000616395 SIAH1Q8IUQ4 282 aa21.2■□□□□ 0.98
TRAPPC3-209ENST00000616395 VTI1AQ96AJ9 217 aa21.2■□□□□ 0.98
TRAPPC3-209ENST00000616395 IL23AQ9NPF7 189 aa21.2■□□□□ 0.98
TRAPPC3-209ENST00000616395 ZNFX1Q9P2E3 1918 aaKnown RBP21.2■□□□□ 0.98
TRAPPC3-209ENST00000616395 CYP2C18P33260 490 aa21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 TMEM179Q6ZVK1 233 aa21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 FAM126BQ8IXS8 530 aa21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 RIOK1Q9BRS2 568 aaKnown RBP21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 RWDD1Q9H446 243 aaPredicted RBP21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 DBNLQ9UJU6 430 aaKnown RBP21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 ADAMTS5Q9UNA0 930 aa21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 TMX2Q9Y320 296 aa21.19■□□□□ 0.98
TRAPPC3-209ENST00000616395 ARVCFO00192 962 aa21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 DUSP11O75319 330 aaKnown RBP21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 SNAI1O95863 264 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 ASGR1P07306 291 aa21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 SKIV2LQ15477 1246 aaKnown RBP21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 MTIF3Q9H2K0 278 aaKnown RBP21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 VCPKMTQ9H867 229 aa21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 FBXO28Q9NVF7 368 aa21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 TLR7Q9NYK1 1049 aaKnown RBP21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 ZHX1Q9UKY1 873 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC3-209ENST00000616395 WDR46O15213 610 aaKnown RBP21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 FGBP02675 491 aa21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 C6orf222P0C671 652 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 CST5P28325 142 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 STAT3P40763 770 aa21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 RABGGTBP53611 331 aa21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 OS9Q13438 667 aaPredicted RBP21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 TMEM31Q5JXX7 168 aa21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 ANTXR1Q9H6X2 564 aa21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 ARHGEF10LQ9HCE6 1279 aa21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 MCM9Q9NXL9 1143 aa21.17■□□□□ 0.98
TRAPPC3-209ENST00000616395 A0A0U1RQG5 324 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 ERC2O15083 957 aa21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 TLR3O15455 904 aaKnown RBP21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 MYOGP15173 224 aa21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 PPP2R2DQ66LE6 453 aa21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 OTOP2Q7RTS6 562 aa21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 PCSK9Q8NBP7 692 aaKnown RBP21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 SH2D4AQ9H788 454 aa21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 ZNF214Q9UL59 606 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 MYO9BQ13459 2157 aa21.16■□□□□ 0.98
TRAPPC3-209ENST00000616395 GBF1Q92538 1859 aa21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 VWA5AO00534 786 aa21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 ADCY6O43306 1168 aa21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 CYP2D6P10635 497 aa21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 ICA1Q05084 483 aa21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 MSL3Q8N5Y2 521 aaKnown RBP21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 CCDC8Q9H0W5 538 aaPredicted RBP21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 PARP14Q460N5 1801 aa21.15■□□□□ 0.98
TRAPPC3-209ENST00000616395 COL11A1P12107 1806 aaPredicted RBP21.14■□□□□ 0.98
TRAPPC3-209ENST00000616395 MAGEB6P1A0A0J9YX57 407 aa21.14■□□□□ 0.97
TRAPPC3-209ENST00000616395 CD4P01730 458 aa21.14■□□□□ 0.97
TRAPPC3-209ENST00000616395 AKR1B1P15121 316 aa21.14■□□□□ 0.97
TRAPPC3-209ENST00000616395 POLA2Q14181 598 aa21.14■□□□□ 0.97
TRAPPC3-209ENST00000616395 UMODL1Q5DID0 1318 aa21.14■□□□□ 0.97
TRAPPC3-209ENST00000616395 NAV1Q8NEY1 1877 aa21.14■□□□□ 0.97
TRAPPC3-209ENST00000616395 COPB2P35606 906 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 GNASQ5JWF2 1037 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 MAMDC4Q6UXC1 1216 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 REPS2Q8NFH8 660 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 DYNLL2Q96FJ2 89 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 UPF3AQ9H1J1 476 aaKnown RBP21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 HIPK3Q9H422 1215 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 SPC25Q9HBM1 224 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 PPP1R9AQ9ULJ8 1098 aa21.13■□□□□ 0.97
TRAPPC3-209ENST00000616395 RFXAPO00287 272 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 ATP8B2P98198 1209 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 ACVR2BQ13705 512 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 CEP85Q6P2H3 762 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 TMED8Q6PL24 325 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 SSH3Q8TE77 659 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 KHSRPQ92945 711 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 DDX11Q96FC9 970 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 CRNKL1Q9BZJ0 848 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 C11orf16Q9NQ32 467 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 PCDHA11Q9Y5I1 949 aa21.12■□□□□ 0.97
TRAPPC3-209ENST00000616395 CCL23P55773 120 aa21.11■□□□□ 0.97
TRAPPC3-209ENST00000616395 GJA9P57773 515 aa21.11■□□□□ 0.97
TRAPPC3-209ENST00000616395 SDR42E1Q8WUS8 393 aa21.11■□□□□ 0.97
TRAPPC3-209ENST00000616395 EAF2Q96CJ1 260 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-209ENST00000616395 SWAP70Q9UH65 585 aa21.11■□□□□ 0.97
TRAPPC3-209ENST00000616395 MTCH2Q9Y6C9 303 aa21.11■□□□□ 0.97
TRAPPC3-209ENST00000616395 SLC4A7Q9Y6M7 1214 aa21.11■□□□□ 0.97
TRAPPC3-209ENST00000616395 DNAJC25-GNG10A0A024R161 153 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms