RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 MTMR7Q9Y216 660 aa20.08■□□□□ 0.8
LHX1-202ENST00000616237 RIPK3Q9Y572 518 aa20.08■□□□□ 0.8
LHX1-202ENST00000616237 IVNS1ABPQ9Y6Y0 642 aa20.08■□□□□ 0.8
LHX1-202ENST00000616237 STRNO43815 780 aa20.07■□□□□ 0.8
LHX1-202ENST00000616237 COBLO75128 1261 aa20.07■□□□□ 0.8
LHX1-202ENST00000616237 SLC25A27O95847 323 aa20.07■□□□□ 0.8
LHX1-202ENST00000616237 NEFLP07196 543 aa20.07■□□□□ 0.8
LHX1-202ENST00000616237 CYP21A2P08686 494 aa20.07■□□□□ 0.8
LHX1-202ENST00000616237 GJA8P48165 433 aa20.07■□□□□ 0.8
LHX1-202ENST00000616237 TTC14Q96N46 770 aa20.07■□□□□ 0.8
LHX1-202ENST00000616237 IGHA2P01877 340 aa20.06■□□□□ 0.8
LHX1-202ENST00000616237 ZKSCAN1P17029 563 aaPredicted RBP20.06■□□□□ 0.8
LHX1-202ENST00000616237 STAT2P52630 851 aa20.06■□□□□ 0.8
LHX1-202ENST00000616237 CPXCR1Q8N123 301 aa20.06■□□□□ 0.8
LHX1-202ENST00000616237 MAP4K1Q92918 833 aa20.06■□□□□ 0.8
LHX1-202ENST00000616237 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
LHX1-202ENST00000616237 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
LHX1-202ENST00000616237 ATP2A1O14983 1001 aa20.05■□□□□ 0.8
LHX1-202ENST00000616237 PLA2G6O60733 806 aa20.05■□□□□ 0.8
LHX1-202ENST00000616237 PRKAR2AP13861 404 aaKnown RBP20.05■□□□□ 0.8
LHX1-202ENST00000616237 CACNB2Q08289 660 aaPredicted RBP20.05■□□□□ 0.8
LHX1-202ENST00000616237 SNRNP48Q6IEG0 339 aaKnown RBP20.05■□□□□ 0.8
LHX1-202ENST00000616237 TTBK2Q6IQ55 1244 aa20.05■□□□□ 0.8
LHX1-202ENST00000616237 ABRAQ8N0Z2 381 aa20.05■□□□□ 0.8
LHX1-202ENST00000616237 U2AF1L4Q8WU68 220 aaKnown RBP20.05■□□□□ 0.8
LHX1-202ENST00000616237 DEFB118Q96PH6 123 aa20.05■□□□□ 0.8
LHX1-202ENST00000616237 ESYT1Q9BSJ8 1104 aa20.05■□□□□ 0.8
LHX1-202ENST00000616237 TEX13BQ9BXU2 312 aa20.05■□□□□ 0.8
LHX1-202ENST00000616237 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.05■□□□□ 0.8
LHX1-202ENST00000616237 ISY1Q9ULR0 285 aaKnown RBP20.05■□□□□ 0.8
LHX1-202ENST00000616237 RPTORQ8N122 1335 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 PDE4DIPQ5VU43 2346 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 ZBED4O75132 1171 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 SGPL1O95470 568 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 NT5C2P49902 561 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 FAM160B2Q86V87 743 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 DGKHQ86XP1 1220 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 TRMT44Q8IYL2 757 aaKnown RBP20.04■□□□□ 0.8
LHX1-202ENST00000616237 CHURC1Q8WUH1 139 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 DCAF4Q8WV16 495 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 ANKS1AQ92625 1134 aa20.04■□□□□ 0.8
LHX1-202ENST00000616237 LSG1Q9H089 658 aaKnown RBP20.04■□□□□ 0.8
LHX1-202ENST00000616237 U3KPZ7 1027 aaPredicted RBP20.04■□□□□ 0.8
LHX1-202ENST00000616237 ZNF536O15090 1300 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 FRMPD2Q68DX3 1309 aaPredicted RBP20.03■□□□□ 0.8
LHX1-202ENST00000616237 SNHG28P0DPA3 235 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 PDHBP11177 359 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 FCER1AP12319 257 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 SNAP25P60880 206 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 STOX1Q6ZVD7 989 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 CYB5R4Q7L1T6 521 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 DPP9Q86TI2 863 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 ENAHQ8N8S7 591 aaPredicted RBP20.03■□□□□ 0.8
LHX1-202ENST00000616237 ZSCAN10Q96SZ4 725 aaPredicted RBP20.03■□□□□ 0.8
LHX1-202ENST00000616237 KRT23Q9C075 422 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 HMX1Q9NP08 348 aaPredicted RBP20.03■□□□□ 0.8
LHX1-202ENST00000616237 PRR12Q9ULL5 1215 aa20.03■□□□□ 0.8
LHX1-202ENST00000616237 RBM8AQ9Y5S9 174 aaKnown RBP20.03■□□□□ 0.8
LHX1-202ENST00000616237 CCND3P30281 292 aaPredicted RBP20.02■□□□□ 0.8
LHX1-202ENST00000616237 CYP2C19P33261 490 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 SLC16A2P36021 539 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 OAZ1P54368 228 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 CCDC96Q2M329 555 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 BTNL9Q6UXG8 535 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 IQCA1Q86XH1 822 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 MMP19Q99542 508 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 CRISPLD2Q9H0B8 497 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 CNNM2Q9H8M5 875 aa20.02■□□□□ 0.8
LHX1-202ENST00000616237 TNKSO95271 1327 aa20.01■□□□□ 0.79
LHX1-202ENST00000616237 PGK2P07205 417 aa20.01■□□□□ 0.79
LHX1-202ENST00000616237 FDX1P10109 184 aa20.01■□□□□ 0.79
LHX1-202ENST00000616237 COPB2P35606 906 aa20.01■□□□□ 0.79
LHX1-202ENST00000616237 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
LHX1-202ENST00000616237 IKQ13123 557 aaPredicted RBP20.01■□□□□ 0.79
LHX1-202ENST00000616237 UBE2Q1Q7Z7E8 422 aa20.01■□□□□ 0.79
LHX1-202ENST00000616237 GPCPD1Q9NPB8 672 aa20.01■□□□□ 0.79
LHX1-202ENST00000616237 ZNFX1Q9P2E3 1918 aaKnown RBP20.01■□□□□ 0.79
LHX1-202ENST00000616237 E7EWF7 191 aa20■□□□□ 0.79
LHX1-202ENST00000616237 ZNF543Q08ER8 600 aa20■□□□□ 0.79
LHX1-202ENST00000616237 SEC23AQ15436 765 aa20■□□□□ 0.79
LHX1-202ENST00000616237 OLFML2BQ68BL8 750 aa20■□□□□ 0.79
LHX1-202ENST00000616237 TRPV1Q8NER1 839 aa20■□□□□ 0.79
LHX1-202ENST00000616237 MAML3Q96JK9 1138 aa20■□□□□ 0.79
LHX1-202ENST00000616237 AGBL1Q96MI9 1066 aa20■□□□□ 0.79
LHX1-202ENST00000616237 CTDP1Q9Y5B0 961 aaPredicted RBP20■□□□□ 0.79
LHX1-202ENST00000616237 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
LHX1-202ENST00000616237 TAL1P17542 331 aaPredicted RBP19.99■□□□□ 0.79
LHX1-202ENST00000616237 KCTD2Q14681 263 aa19.99■□□□□ 0.79
LHX1-202ENST00000616237 ZNF792Q3KQV3 632 aa19.99■□□□□ 0.79
LHX1-202ENST00000616237 CCDC178Q5BJE1 867 aa19.99■□□□□ 0.79
LHX1-202ENST00000616237 MFSD14CQ5VZR4 134 aa19.99■□□□□ 0.79
LHX1-202ENST00000616237 PNMA1Q8ND90 353 aa19.99■□□□□ 0.79
LHX1-202ENST00000616237 DNAJC25-GNG10A0A024R161 153 aa19.98■□□□□ 0.79
LHX1-202ENST00000616237 COL9A3Q14050 684 aaPredicted RBP19.98■□□□□ 0.79
LHX1-202ENST00000616237 SYDE2Q5VT97 1194 aa19.98■□□□□ 0.79
LHX1-202ENST00000616237 CCDC174Q6PII3 467 aa19.98■□□□□ 0.79
LHX1-202ENST00000616237 KIAA1211Q6ZU35 1233 aa19.98■□□□□ 0.79
LHX1-202ENST00000616237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.98■□□□□ 0.79
LHX1-202ENST00000616237 RANBP17Q9H2T7 1088 aaKnown RBP19.98■□□□□ 0.79
LHX1-202ENST00000616237 TFRCP02786 760 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms