RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 BTNL9Q6UXG8 535 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 HOMER1Q86YM7 354 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 GBA2Q9HCG7 927 aaPredicted RBP15.9■□□□□ 0.14
TMEM254-213ENST00000613758 SEC63Q9UGP8 760 aaKnown RBP15.9■□□□□ 0.14
TMEM254-213ENST00000613758 UNCXA6NJT0 531 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 TRAK2O60296 914 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 F13A1P00488 732 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 XBP1P17861 261 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 PPATQ06203 517 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 DGKZQ13574 1117 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 C2orf69Q8N8R5 385 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 PAPPA2Q9BXP8 1791 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 SPDYE5A6NIY4 337 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 WDR46O15213 610 aaKnown RBP15.89■□□□□ 0.13
TMEM254-213ENST00000613758 STAT2P52630 851 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 HMGCS2P54868 508 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 SYDE2Q5VT97 1194 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 RBM46Q8TBY0 533 aaKnown RBP15.89■□□□□ 0.13
TMEM254-213ENST00000613758 CHURC1Q8WUH1 139 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 SLC10A4Q96EP9 437 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 LMBRD1Q9NUN5 540 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 VPS54Q9P1Q0 977 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 FEM1BQ9UK73 627 aa15.89■□□□□ 0.13
TMEM254-213ENST00000613758 OTOFQ9HC10 1997 aa15.88■□□□□ 0.13
TMEM254-213ENST00000613758 PLA2G6O60733 806 aa15.88■□□□□ 0.13
TMEM254-213ENST00000613758 FERMT3Q86UX7 667 aa15.88■□□□□ 0.13
TMEM254-213ENST00000613758 GPKOWQ92917 476 aaPredicted RBP eCLIP15.88■□□□□ 0.13
TMEM254-213ENST00000613758 MTMR8Q96EF0 704 aa15.88■□□□□ 0.13
TMEM254-213ENST00000613758 KCNJ14Q9UNX9 436 aa15.88■□□□□ 0.13
TMEM254-213ENST00000613758 PNMA6FA0A0J9YX94 578 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 KIF3CO14782 793 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 VCAM1P19320 739 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 CST9Q5W186 159 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 HEATR3Q7Z4Q2 680 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 FAM160B2Q86V87 743 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 SHISA4Q96DD7 197 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 C12orf42Q96LP6 360 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 TMOD4Q9NZQ9 345 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 PRR12Q9ULL5 1215 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 PHIPQ8WWQ0 1821 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 MYH15Q9Y2K3 1946 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 PTMSP20962 102 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 SH3D19Q5HYK7 790 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 WWC2Q6AWC2 1192 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 OPTNQ96CV9 577 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 SH3GLB2Q9NR46 395 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 MYH6P13533 1939 aa15.87■□□□□ 0.13
TMEM254-213ENST00000613758 GOLGA6L22H0YM25 854 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 IRF6O14896 467 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 ZBTB5O15062 677 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 MMP1P03956 469 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 KIFC2Q96AC6 838 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 RPAP3Q9H6T3 665 aaPredicted RBP15.86■□□□□ 0.13
TMEM254-213ENST00000613758 FBXO28Q9NVF7 368 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 BARHL2Q9NY43 387 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 CXCL11O14625 94 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 SNAP25P60880 206 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 RESTQ13127 1097 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 PPIL2Q13356 520 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 CDC37Q16543 378 aaPredicted RBP15.86■□□□□ 0.13
TMEM254-213ENST00000613758 PHF20Q9BVI0 1012 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 TANGO6Q9C0B7 1094 aa15.86■□□□□ 0.13
TMEM254-213ENST00000613758 ZSCAN16Q9H4T2 348 aaPredicted RBP15.86■□□□□ 0.13
TMEM254-213ENST00000613758 STXBP3O00186 592 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 NLRP5P59047 1200 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 SAFBQ15424 915 aaKnown RBP eCLIP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 QRICH1Q2TAL8 776 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 KCNH4Q9UQ05 1017 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 hCG_1984214I3L0E3 225 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 PPP1R11O60927 126 aaPredicted RBP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 KIF23Q02241 960 aaPredicted RBP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 FOXD4L6Q3SYB3 417 aaPredicted RBP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 TYW1BQ6NUM6 668 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 FOXD4L3Q6VB84 417 aaPredicted RBP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 ZNF713Q8N859 430 aaPredicted RBP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 PRPF38AQ8NAV1 312 aaKnown RBP15.85■□□□□ 0.13
TMEM254-213ENST00000613758 SLF1Q9BQI6 1058 aa15.85■□□□□ 0.13
TMEM254-213ENST00000613758 DIS3L2Q8IYB7 885 aaKnown RBP15.84■□□□□ 0.13
TMEM254-213ENST00000613758 FAM177A1Q8N128 213 aaPredicted RBP15.84■□□□□ 0.13
TMEM254-213ENST00000613758 SMC1BQ8NDV3 1235 aa15.84■□□□□ 0.13
TMEM254-213ENST00000613758 CCDC148Q8NFR7 591 aa15.84■□□□□ 0.13
TMEM254-213ENST00000613758 COA7Q96BR5 231 aa15.84■□□□□ 0.13
TMEM254-213ENST00000613758 A0A0G2JLL6 359 aaPredicted RBP15.83■□□□□ 0.13
TMEM254-213ENST00000613758 KIF28PB7ZC32 967 aa15.83■□□□□ 0.13
TMEM254-213ENST00000613758 PRPF40AO75400 957 aaKnown RBP15.83■□□□□ 0.13
TMEM254-213ENST00000613758 FLOT1O75955 427 aa15.83■□□□□ 0.13
TMEM254-213ENST00000613758 GJA5P36382 358 aa15.83■□□□□ 0.13
TMEM254-213ENST00000613758 NAPAP54920 295 aa15.83■□□□□ 0.13
TMEM254-213ENST00000613758 GNL2Q13823 731 aaKnown RBP15.83■□□□□ 0.13
TMEM254-213ENST00000613758 PRRT2Q7Z6L0 340 aaPredicted RBP15.83■□□□□ 0.13
TMEM254-213ENST00000613758 CCDC12Q8WUD4 166 aaPredicted RBP15.83■□□□□ 0.13
TMEM254-213ENST00000613758 PASKQ96RG2 1323 aa15.83■□□□□ 0.12
TMEM254-213ENST00000613758 BTBD18B2RXH4 712 aa15.83■□□□□ 0.12
TMEM254-213ENST00000613758 CALML3P27482 149 aa15.83■□□□□ 0.12
TMEM254-213ENST00000613758 SKOR2Q2VWA4 1001 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms