RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 IL16Q14005 1332 aa11.87□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CSE1LP55060 971 aaKnown RBP11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RBBP4Q09028 425 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MUM1Q2TAK8 710 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GUCA1CO95843 209 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DNM1Q05193 864 aaKnown RBP11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ARHGAP45Q92619 1136 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ECHDC1Q9NTX5 307 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TYW5A2RUC4 315 aaKnown RBP11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SNRKQ9NRH2 765 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GALNT8Q9NY28 637 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 WDR44Q5JSH3 913 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PLEKHG3A1L390 1219 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TBKBP1A7MCY6 615 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MAN1A2O60476 641 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SLC8A1P32418 973 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CDC37Q16543 378 aaPredicted RBP11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 EXD1Q8NHP7 514 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 AK9Q5TCS8 1911 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 OTOL1A6NHN0 477 aaPredicted RBP11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 UBA7P41226 1012 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 WASHC5Q12768 1159 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 FGD2Q7Z6J4 655 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CEP126Q9P2H0 1117 aa11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NUP153P49790 1475 aaKnown RBP11.86□□□□□ -0.51
CNTNAP3B-211ENST00000612828 IFIT3O14879 490 aaKnown RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CCSAPQ6IQ19 270 aaPredicted RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PATL1Q86TB9 770 aaKnown RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PRPF6O94906 941 aaKnown RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SERPIND1P05546 499 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ZSCAN22P10073 491 aaPredicted RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ABRQ12979 859 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CEP78Q5JTW2 689 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SPZ1Q9BXG8 430 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 B4DLN1 442 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RFC4P35249 363 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MRPL12P52815 198 aaKnown RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GAS2L3Q86XJ1 694 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 RNF10Q8N5U6 811 aaKnown RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TRIM31Q9BZY9 425 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DCTPP1Q9H773 170 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ANKRD12Q6UB98 2062 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 NEMP1O14524 444 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TTC4O95801 387 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KCNG4Q8TDN1 519 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PLIN2Q99541 437 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KLC2Q9H0B6 622 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SH2B1Q9NRF2 756 aaPredicted RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ZBTB7BO15156 539 aaPredicted RBP11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ALFQ53S48 1182 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PZPP20742 1482 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GRIN2AQ12879 1464 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SCGNO76038 276 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 STAT6P42226 847 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ST7Q9NRC1 585 aa11.85□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ITGAXP20702 1163 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 FSIP1Q8NA03 581 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CLCA4Q14CN2 919 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KIAA1841Q6NSI8 718 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ABI1Q8IZP0 508 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 BRF1Q92994 677 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 USP26Q9BXU7 913 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ZMYND8Q9ULU4 1186 aaPredicted RBP11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 HAND2P61296 217 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KRT32Q14532 448 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TAF11Q15544 211 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 FBXL13Q8NEE6 735 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MRFAP1Q9Y605 127 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KRT81Q14533 505 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MED4Q9NPJ6 270 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MAD1L1Q9Y6D9 718 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DDHD2O94830 711 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GSNP06396 782 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 KAZNQ674X7 775 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PLEKHA4Q9H4M7 779 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 IFT122Q9HBG6 1241 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 DACT1Q9NYF0 836 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 CAPN11Q9UMQ6 739 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SPOPO43791 374 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 MYCLP12524 364 aaPredicted RBP11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GRIN1Q05586 938 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SEL1L2Q5TEA6 688 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 G2E3Q7L622 706 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PROSER2Q86WR7 435 aaPredicted RBP11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 APOL6Q9BWW8 343 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TEX12Q9BXU0 123 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms