RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 SNHG28P0DPA3 235 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 AKAP17AQ02040 695 aaKnown RBP14.89□□□□□ -0.03
PRKN-210ENST00000612540 TTBK2Q6IQ55 1244 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 TRIM22Q8IYM9 498 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 NSUN7Q8NE18 718 aaKnown RBP14.89□□□□□ -0.03
PRKN-210ENST00000612540 LPAR1Q92633 364 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 PHKBQ93100 1093 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 LZTS2Q9BRK4 669 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 LLPHQ9BRT6 129 aaKnown RBP14.89□□□□□ -0.03
PRKN-210ENST00000612540 SLC26A6Q9BXS9 759 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 TANGO6Q9C0B7 1094 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 UBA5Q9GZZ9 404 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 CPVLQ9H3G5 476 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 EMILIN3Q9NT22 766 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 CNTNAP5Q8WYK1 1306 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 WDR46O15213 610 aaKnown RBP14.88□□□□□ -0.03
PRKN-210ENST00000612540 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 IFNAR1P17181 557 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 VCAM1P19320 739 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 SLC16A2P36021 539 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 GJA5P36382 358 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 TM4SF4P48230 202 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 SSRP1Q08945 709 aaKnown RBP14.88□□□□□ -0.03
PRKN-210ENST00000612540 SNAPC2Q13487 334 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 SRBD1Q8N5C6 995 aaKnown RBP14.88□□□□□ -0.03
PRKN-210ENST00000612540 FAM184AQ8NB25 1140 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 INTS4Q96HW7 963 aaKnown RBP14.88□□□□□ -0.03
PRKN-210ENST00000612540 VAT1LQ9HCJ6 419 aa14.88□□□□□ -0.03
PRKN-210ENST00000612540 ORC3Q9UBD5 711 aaPredicted RBP14.88□□□□□ -0.03
PRKN-210ENST00000612540 CXCL11O14625 94 aa14.87□□□□□ -0.03
PRKN-210ENST00000612540 GJB2P29033 226 aa14.87□□□□□ -0.03
PRKN-210ENST00000612540 FOSBP53539 338 aa14.87□□□□□ -0.03
PRKN-210ENST00000612540 HMGN5P82970 282 aaKnown RBP14.87□□□□□ -0.03
PRKN-210ENST00000612540 HOMER1Q86YM7 354 aa14.87□□□□□ -0.03
PRKN-210ENST00000612540 RPAP3Q9H6T3 665 aaPredicted RBP14.87□□□□□ -0.03
PRKN-210ENST00000612540 KCNH4Q9UQ05 1017 aa14.87□□□□□ -0.03
PRKN-210ENST00000612540 KIF3AQ9Y496 699 aa14.87□□□□□ -0.03
PRKN-210ENST00000612540 A0A0G2JLL6 359 aaPredicted RBP14.86□□□□□ -0.03
PRKN-210ENST00000612540 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 FMNL1O95466 1100 aaPredicted RBP14.86□□□□□ -0.03
PRKN-210ENST00000612540 STAT2P52630 851 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 NTRK3Q16288 839 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 SH3D19Q5HYK7 790 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 SYDE2Q5VT97 1194 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 SPRYD7Q5W111 196 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 PRRT2Q7Z6L0 340 aaPredicted RBP14.86□□□□□ -0.03
PRKN-210ENST00000612540 CTU1Q7Z7A3 348 aaKnown RBP14.86□□□□□ -0.03
PRKN-210ENST00000612540 NBPF11Q86T75 865 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 CHURC1Q8WUH1 139 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 KIFC2Q96AC6 838 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 C12orf42Q96LP6 360 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 SPZ1Q9BXG8 430 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 SEC63Q9UGP8 760 aaKnown RBP14.86□□□□□ -0.03
PRKN-210ENST00000612540 FEM1BQ9UK73 627 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 PARP14Q460N5 1801 aa14.86□□□□□ -0.03
PRKN-210ENST00000612540 PDE4DIPQ5VU43 2346 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 FLOT1O75955 427 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 TBC1D8O95759 1140 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 ZBTB48P10074 688 aaPredicted RBP14.85□□□□□ -0.03
PRKN-210ENST00000612540 GTF2A2P52657 109 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 SOX10P56693 466 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 FAM160B2Q86V87 743 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 PROCA1Q8NCQ7 364 aaPredicted RBP14.85□□□□□ -0.03
PRKN-210ENST00000612540 SMARCC2Q8TAQ2 1214 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 RRP36Q96EU6 259 aaKnown RBP14.85□□□□□ -0.03
PRKN-210ENST00000612540 RNF26Q9BY78 433 aaPredicted RBP14.85□□□□□ -0.03
PRKN-210ENST00000612540 FBXO28Q9NVF7 368 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 CTDP1Q9Y5B0 961 aaPredicted RBP14.85□□□□□ -0.03
PRKN-210ENST00000612540 V9GY48 417 aaPredicted RBP14.85□□□□□ -0.03
PRKN-210ENST00000612540 STK36Q9NRP7 1315 aa14.85□□□□□ -0.03
PRKN-210ENST00000612540 TNRC18O15417 2968 aaPredicted RBP14.85□□□□□ -0.03
PRKN-210ENST00000612540 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L15C9J2P7 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L13C9JLJ4 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L11C9JVI0 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L18D6R9N7 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L22D6RA61 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L17D6RBQ6 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L19D6RCP7 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L20D6RJB6 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 CYTH3O43739 400 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 CETPP11597 493 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 USP17L24Q0WX57 530 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 FUT2Q10981 343 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 CCL15Q16663 113 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 SLC35G1Q2M3R5 365 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 NOM1Q5C9Z4 860 aaKnown RBP14.84□□□□□ -0.03
PRKN-210ENST00000612540 TREML2Q5T2D2 321 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 FASTKD5Q7L8L6 764 aaKnown RBP14.84□□□□□ -0.03
PRKN-210ENST00000612540 ADGRF4Q8IZF3 695 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 ZNF296Q8WUU4 475 aaPredicted RBP14.84□□□□□ -0.03
PRKN-210ENST00000612540 WASF1Q92558 559 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 PIGSQ96S52 555 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 SLF1Q9BQI6 1058 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 CFHR5Q9BXR6 569 aa14.84□□□□□ -0.03
PRKN-210ENST00000612540 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
PRKN-210ENST00000612540 PRPF3O43395 683 aaKnown RBP14.83□□□□□ -0.04
PRKN-210ENST00000612540 DEXIO95424 95 aa14.83□□□□□ -0.04
PRKN-210ENST00000612540 SMARCA1P28370 1054 aa14.83□□□□□ -0.04
PRKN-210ENST00000612540 SNAP25P60880 206 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms