RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TRIM65Q6PJ69 517 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 BRMS1Q9HCU9 246 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 FAM205CA6NFA0 338 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 SPECC1LQ69YQ0 1117 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 REXO1L1PQ8IX06 675 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 PDILTQ8N807 584 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 MED15Q96RN5 788 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 MTFR1LQ9H019 292 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 CNTNAP5Q8WYK1 1306 aa16.69■□□□□ 0.26
CDH1-213ENST00000612417 ZSCAN12O43309 604 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 STX10O60499 249 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 NMT2O60551 498 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 RBM5P52756 815 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDH1-213ENST00000612417 TFAP4Q01664 338 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 EARS2Q5JPH6 523 aaKnown RBP16.68■□□□□ 0.26
CDH1-213ENST00000612417 DACT2Q5SW24 774 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
CDH1-213ENST00000612417 ZNF444Q8N0Y2 327 aaPredicted RBP16.68■□□□□ 0.26
CDH1-213ENST00000612417 V9GY48 417 aaPredicted RBP16.68■□□□□ 0.26
CDH1-213ENST00000612417 A0A087X0B3 334 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 ATP2B1P20020 1258 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 CRKP46108 304 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 ELF2Q15723 593 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 KMT5BQ4FZB7 885 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 HOMER1Q86YM7 354 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
CDH1-213ENST00000612417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDH1-213ENST00000612417 A0A1B0GTH6 734 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 GOLGA6L9A6NEM1 432 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 CDK11BP21127 795 aaKnown RBP16.67■□□□□ 0.26
CDH1-213ENST00000612417 DMTNQ08495 405 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 NR1I3Q14994 352 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 TC2NQ8N9U0 490 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 SLC44A5Q8NCS7 719 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 GSDMAQ96QA5 445 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 PIM2Q9P1W9 311 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 ADAMTSL1Q8N6G6 1762 aa16.67■□□□□ 0.26
CDH1-213ENST00000612417 KIF13BQ9NQT8 1826 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 TRAPPC10P48553 1259 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 NT5C2P49902 561 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 FKBP1AP62942 108 aaKnown RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 ATP2C1P98194 919 aaPredicted RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 TRMT44Q8IYL2 757 aaKnown RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 DHX58Q96C10 678 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 PAGE5Q96GU1 130 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 BAG1Q99933 345 aaPredicted RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 SRRTQ9BXP5 876 aaKnown RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 FOCADQ5VW36 1801 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 BAZ2BQ9UIF8 2168 aaKnown RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 SNED1Q8TER0 1413 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 TSPY3P0CV98 308 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 TSPY8P0CW00 308 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 TGFB2P61812 414 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 DPYDQ12882 1025 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 CUL4BQ13620 913 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 TTC38Q5R3I4 469 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 FBXO38Q6PIJ6 1188 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 CTCFLQ8NI51 663 aaPredicted RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 GTPBP4Q9BZE4 634 aaKnown RBP16.66■□□□□ 0.26
CDH1-213ENST00000612417 PPP2R2CQ9Y2T4 447 aa16.66■□□□□ 0.26
CDH1-213ENST00000612417 WNT7AO00755 349 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 CDK8P49336 464 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 SPATA1Q5VX52 437 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 APTXQ7Z2E3 356 aaKnown RBP16.65■□□□□ 0.26
CDH1-213ENST00000612417 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
CDH1-213ENST00000612417 PSMD1Q99460 953 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 SAMSN1Q9NSI8 373 aaKnown RBP16.65■□□□□ 0.26
CDH1-213ENST00000612417 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDH1-213ENST00000612417 DNAI1Q9UI46 699 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 V9GYY5 206 aaPredicted RBP16.65■□□□□ 0.26
CDH1-213ENST00000612417 VWA3AA6NCI4 1184 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 APOBEC3HQ6NTF7 200 aaKnown RBP16.65■□□□□ 0.26
CDH1-213ENST00000612417 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
CDH1-213ENST00000612417 FAM53CQ9NYF3 392 aa16.65■□□□□ 0.26
CDH1-213ENST00000612417 hCG_1642624A0A1W2PR95 340 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 YDJCA8MPS7 323 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 SCG2P13521 617 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 H2AFXP16104 143 aaPredicted RBP16.64■□□□□ 0.25
CDH1-213ENST00000612417 HSP90AA4PQ58FG1 418 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 DALRD3Q5D0E6 543 aaKnown RBP16.64■□□□□ 0.25
CDH1-213ENST00000612417 SOGA3Q5TF21 947 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 C16orf86Q6ZW13 317 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 DDX4Q9NQI0 724 aaKnown RBP16.64■□□□□ 0.25
CDH1-213ENST00000612417 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
CDH1-213ENST00000612417 SYNRGQ9UMZ2 1314 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms