RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 NAP1L3Q99457 506 aaPredicted RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 MED4Q9NPJ6 270 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 TNFAIP3P21580 790 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 EEF1GP26641 437 aaKnown RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 DHX40Q8IX18 779 aaKnown RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 DDX12PQ92771 950 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 NT5C3AQ9H0P0 336 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 DDX41Q9UJV9 622 aaKnown RBP13.8□□□□□ -0.2
CDH1-212ENST00000611625 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
CDH1-212ENST00000611625 FLOT1O75955 427 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 TCP1P17987 556 aaKnown RBP13.79□□□□□ -0.2
CDH1-212ENST00000611625 SLC1A4P43007 532 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 GRIPAP1Q4V328 841 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 CCDC25Q86WR0 208 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 ACRBPQ8NEB7 543 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 EXOSC10Q01780 885 aaKnown RBP13.79□□□□□ -0.2
CDH1-212ENST00000611625 MSL1Q68DK7 614 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 CYB5R4Q7L1T6 521 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 FAM71BQ8TC56 605 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 RASGRP4Q8TDF6 673 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 PANX2Q96RD6 677 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 SLC39A2Q9NP94 309 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 ZNF609O15014 1411 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 PRPF3O43395 683 aaKnown RBP13.79□□□□□ -0.2
CDH1-212ENST00000611625 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
CDH1-212ENST00000611625 SIK1P57059 783 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 CALCOCO2Q13137 446 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 CNOT6LQ96LI5 555 aaKnown RBP13.79□□□□□ -0.2
CDH1-212ENST00000611625 PARD6BQ9BYG5 372 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 ATP6V0A2Q9Y487 856 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 B4DLN1 442 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 IQCB1Q15051 598 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 PAGE5Q96GU1 130 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 LSM14BQ9BX40 385 aaKnown RBP13.79□□□□□ -0.2
CDH1-212ENST00000611625 MAGEF1Q9HAY2 307 aa13.79□□□□□ -0.2
CDH1-212ENST00000611625 ENC1O14682 589 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 PNMA6AP0CW24 399 aaPredicted RBP13.78□□□□□ -0.2
CDH1-212ENST00000611625 INPP5BP32019 993 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 FRMPD1Q5SYB0 1578 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 SEL1L2Q5TEA6 688 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
CDH1-212ENST00000611625 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 STK36Q9NRP7 1315 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 ERVV-1B6SEH8 477 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 CHMP2AO43633 222 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 NEDD4P46934 1319 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 ADGRB2O60241 1585 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 VWDEQ8N2E2 1590 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 TMEM232C9JQI7 657 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 GJC1P36383 396 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 SF3B2Q13435 895 aaKnown RBP13.78□□□□□ -0.2
CDH1-212ENST00000611625 RUFY4Q6ZNE9 571 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 PIGBQ92521 554 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 CUEDC2Q9H467 287 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 TAF6LQ9Y6J9 622 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 MROH2AA6NES4 1674 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 GNA14O95837 355 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 FOXO4P98177 505 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 PPP1R7Q15435 360 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 TRIM31Q9BZY9 425 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 RWDD2AQ9UIY3 292 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 PCDHA4Q9UN74 947 aa13.78□□□□□ -0.2
CDH1-212ENST00000611625 SEMA3EO15041 775 aa13.77□□□□□ -0.2
CDH1-212ENST00000611625 CHGBP05060 677 aa13.77□□□□□ -0.2
CDH1-212ENST00000611625 CDC25AP30304 524 aa13.77□□□□□ -0.2
CDH1-212ENST00000611625 PPM1EQ8WY54 764 aa13.77□□□□□ -0.2
CDH1-212ENST00000611625 PAIP2Q9BPZ3 127 aaKnown RBP13.77□□□□□ -0.2
CDH1-212ENST00000611625 ABCC12Q96J65 1359 aa13.77□□□□□ -0.2
CDH1-212ENST00000611625 SALL3Q9BXA9 1300 aa13.77□□□□□ -0.2
CDH1-212ENST00000611625 PEX26Q7Z412 305 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 DHTKD1Q96HY7 919 aaPredicted RBP13.77□□□□□ -0.21
CDH1-212ENST00000611625 HDAC9Q9UKV0 1011 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 UTP11Q9Y3A2 253 aaKnown RBP13.77□□□□□ -0.21
CDH1-212ENST00000611625 KDM3AQ9Y4C1 1321 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 CYP2D7A0A087X1C5 515 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 EEF2P13639 858 aaKnown RBP13.77□□□□□ -0.21
CDH1-212ENST00000611625 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 ATG9AQ7Z3C6 839 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 PLEKHA4Q9H4M7 779 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 SAMD15Q9P1V8 674 aa13.77□□□□□ -0.21
CDH1-212ENST00000611625 LAD1O00515 517 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 TOM1O60784 492 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 HLFQ16534 295 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 SCLT1Q96NL6 688 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 ZBTB21Q9ULJ3 1066 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 ACTN4O43707 911 aaKnown RBP13.76□□□□□ -0.21
CDH1-212ENST00000611625 SPOPO43791 374 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 CDC27P30260 824 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 GPBP1Q86WP2 473 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 CEP57Q86XR8 500 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 ANKRD13CQ8N6S4 541 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 GOLGA5Q8TBA6 731 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 STAG1Q8WVM7 1258 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 KIF28PB7ZC32 967 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 MFAP3LO75121 409 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms