RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 RHBDL3P58872 404 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 IL17AQ16552 155 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 ZNF658Q5TYW1 1059 aaPredicted RBP11.82□□□□□ -0.52
PABPC1-224ENST00000610907 WWC2Q6AWC2 1192 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 TMEM139Q8IV31 216 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 TC2NQ8N9U0 490 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 CUEDC2Q9H467 287 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 MAGEF1Q9HAY2 307 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 C6orf50Q9HD87 102 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 FLT1P17948 1338 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 AFF2P51816 1311 aa11.82□□□□□ -0.52
PABPC1-224ENST00000610907 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 CYTH3O43739 400 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 KCNB1Q14721 858 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 APTXQ7Z2E3 356 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 REXO1L1PQ8IX06 675 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 TRMT44Q8IYL2 757 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 GPKOWQ92917 476 aaPredicted RBP eCLIP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 CCDC51Q96ER9 411 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 RRP36Q96EU6 259 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 FEZ1Q99689 392 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 COA1Q9GZY4 146 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 ADD3Q9UEY8 706 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 RGS17Q9UGC6 210 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 LIMA1Q9UHB6 759 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 PLIN4Q96Q06 1357 aa11.81□□□□□ -0.52
PABPC1-224ENST00000610907 DDX60LQ5H9U9 1706 aaKnown RBP11.81□□□□□ -0.52
PABPC1-224ENST00000610907 AKR1B15C9JRZ8 316 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-224ENST00000610907 RPN1P04843 607 aaKnown RBP11.8□□□□□ -0.52
PABPC1-224ENST00000610907 PBX1P40424 430 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 STAT6P42226 847 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 CCDC93Q567U6 631 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 HEATR3Q7Z4Q2 680 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 PPFIBP1Q86W92 1011 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 DISC1Q9NRI5 854 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 POLLQ9UGP5 575 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 SAP30BPQ9UHR5 308 aaKnown RBP11.8□□□□□ -0.52
PABPC1-224ENST00000610907 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 BAZ2BQ9UIF8 2168 aaKnown RBP11.8□□□□□ -0.52
PABPC1-224ENST00000610907 MYO3BQ8WXR4 1341 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 LRRC37AA6NMS7 1700 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 SNED1Q8TER0 1413 aa11.8□□□□□ -0.52
PABPC1-224ENST00000610907 H7C1D1 291 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 POLRMTO00411 1230 aaKnown RBP11.79□□□□□ -0.52
PABPC1-224ENST00000610907 UBA7P41226 1012 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 PAK1Q13153 545 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■■□□ 15.9
PABPC1-224ENST00000610907 SLC35G1Q2M3R5 365 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 SLC4A8Q2Y0W8 1093 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 SOGA3Q5TF21 947 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 RRAGBQ5VZM2 374 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 SYT10Q6XYQ8 523 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 SLC44A5Q8NCS7 719 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 MTRQ99707 1265 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 SEC63Q9UGP8 760 aaKnown RBP11.79□□□□□ -0.52
PABPC1-224ENST00000610907 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-224ENST00000610907 PPP2R2CQ9Y2T4 447 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 ATP6V0A2Q9Y487 856 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.79□□□□□ -0.52
PABPC1-224ENST00000610907 C6orf229H3BNL8 230 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 ADAMTS3O15072 1205 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 TPM1P09493 284 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 HOXA7P31268 230 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-224ENST00000610907 PPP1R2P41236 205 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 NAPAP54920 295 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 TRIM14Q14142 442 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 KLHL10Q6JEL2 608 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 CNGA4Q8IV77 575 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 UBE2Q2Q8WVN8 375 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 GPR101Q96P66 508 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-224ENST00000610907 RIOX1Q9H6W3 641 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 KBTBD4Q9NVX7 518 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
PABPC1-224ENST00000610907 C10orf71Q711Q0 1435 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 LTBP1Q14766 1721 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 MYH1P12882 1939 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 PPEF1O14829 653 aaPredicted RBP11.78□□□□□ -0.52
PABPC1-224ENST00000610907 STX17P56962 302 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 GABPAQ06546 454 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 DDR1Q08345 913 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 STIM1Q13586 685 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 INF2Q27J81 1249 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 ASPRV1Q53RT3 343 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 CCDC47Q96A33 483 aaKnown RBP11.78□□□□□ -0.52
PABPC1-224ENST00000610907 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
PABPC1-224ENST00000610907 FOCADQ5VW36 1801 aa11.77□□□□□ -0.52
PABPC1-224ENST00000610907 RHOBTB3O94955 611 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 OR52Z1P0C646 297 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms