RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TEX13BQ9BXU2 312 aa20.85■□□□□ 0.93
CHMP4A-211ENST00000609024 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 COL11A1P12107 1806 aaPredicted RBP20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 USP17L12C9JPN9 530 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 USP17L21D6R901 530 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 C6orf222P0C671 652 aaPredicted RBP20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 C12orf60Q5U649 245 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 SNRNP48Q6IEG0 339 aaKnown RBP20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 C16orf86Q6ZW13 317 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 KIF1BPQ96EK5 621 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 SLF1Q9BQI6 1058 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 PAG1Q9NWQ8 432 aa20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 ZNF214Q9UL59 606 aaPredicted RBP20.84■□□□□ 0.93
CHMP4A-211ENST00000609024 ELP1O95163 1332 aa20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 CYP2D7A0A087X1C5 515 aa20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 DUSP11O75319 330 aaKnown RBP20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 COL9A1P20849 921 aa20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 PSRC1Q6PGN9 363 aaPredicted RBP20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 USP38Q8NB14 1042 aa20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 MTIF3Q9H2K0 278 aaKnown RBP20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 MSRAQ9UJ68 235 aa20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 SLC4A4Q9Y6R1 1079 aa20.83■□□□□ 0.93
CHMP4A-211ENST00000609024 PRUNE2Q8WUY3 3088 aa20.83■□□□□ 0.92
CHMP4A-211ENST00000609024 ZBED4O75132 1171 aa20.82■□□□□ 0.92
CHMP4A-211ENST00000609024 HMMRO75330 724 aa20.82■□□□□ 0.92
CHMP4A-211ENST00000609024 ADD2P35612 726 aa20.82■□□□□ 0.92
CHMP4A-211ENST00000609024 ATXN2LQ8WWM7 1075 aaKnown RBP20.82■□□□□ 0.92
CHMP4A-211ENST00000609024 THEGQ9P2T0 379 aa20.82■□□□□ 0.92
CHMP4A-211ENST00000609024 PARP14Q460N5 1801 aa20.82■□□□□ 0.92
CHMP4A-211ENST00000609024 A0A0U1RQG5 324 aaPredicted RBP20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 RLBP1P12271 317 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 ZSCAN25Q6NSZ9 544 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 CPXCR1Q8N123 301 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 ANKRD35Q8N283 1001 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 PRPF38AQ8NAV1 312 aaKnown RBP20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 KLHDC9Q8NEP7 349 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 BOLA2Q9H3K6 86 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 PRDM12Q9H4Q4 367 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 TBX21Q9UL17 535 aa20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 SPTBN5Q9NRC6 3674 aaKnown RBP20.81■□□□□ 0.92
CHMP4A-211ENST00000609024 BAZ2AQ9UIF9 1905 aaKnown RBP20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 SNAI1O95863 264 aaPredicted RBP20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 ASGR1P07306 291 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 CSF2RAP15509 400 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 IGFBP4P22692 258 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 ACVR2BQ13705 512 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 RAB30Q15771 203 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 GNASQ5JWF2 1037 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 AKNAD1Q5T1N1 836 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 PBX4Q9BYU1 374 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 PPP1R12CQ9BZL4 782 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 TSPYL2Q9H2G4 693 aaPredicted RBP20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 ABHD16BQ9H3Z7 469 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 MKNK2Q9HBH9 465 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 TTC28Q96AY4 2481 aa20.8■□□□□ 0.92
CHMP4A-211ENST00000609024 CST5P28325 142 aaPredicted RBP20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 TMEM240Q5SV17 173 aa20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 MAMDC4Q6UXC1 1216 aa20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 NOL8Q76FK4 1167 aaKnown RBP20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 ZNF467Q7Z7K2 595 aaPredicted RBP20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 REPS2Q8NFH8 660 aa20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 NUP88Q99567 741 aaPredicted RBP20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 ARPP21Q9UBL0 812 aaPredicted RBP20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 FBXO40Q9UH90 709 aa20.79■□□□□ 0.92
CHMP4A-211ENST00000609024 CDH23Q9H251 3354 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 GRXCR1A8MXD5 290 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 ARVCFO00192 962 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 ACRP10323 421 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 PBX2P40425 430 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 MRPS5P82675 430 aaKnown RBP20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 UBE3CQ15386 1083 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 CCDC85BQ15834 202 aaPredicted RBP20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 KIFC2Q96AC6 838 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 ASB2Q96Q27 587 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 SLC28A3Q9HAS3 691 aa20.78■□□□□ 0.92
CHMP4A-211ENST00000609024 MYADML2A6NDP7 307 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 F5H6K3 240 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 RAB11FIP3O75154 756 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 CDK7P50613 346 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 KLRC3Q07444 240 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 CCDC144BQ3MJ40 725 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 SLFNL1Q499Z3 407 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 CCSAPQ6IQ19 270 aaPredicted RBP20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 CTR9Q6PD62 1173 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 STK11IPQ8N1F8 1099 aa20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 ISY1Q9ULR0 285 aaKnown RBP20.77■□□□□ 0.92
CHMP4A-211ENST00000609024 SMIM22K7EJ46 135 aa20.76■□□□□ 0.91
CHMP4A-211ENST00000609024 MS4A1P11836 297 aa20.76■□□□□ 0.91
CHMP4A-211ENST00000609024 GJA9P57773 515 aa20.76■□□□□ 0.91
CHMP4A-211ENST00000609024 RPAP2Q8IXW5 612 aaPredicted RBP20.76■□□□□ 0.91
CHMP4A-211ENST00000609024 ADAMTS19Q8TE59 1207 aa20.76■□□□□ 0.91
CHMP4A-211ENST00000609024 ZNF287Q9HBT7 754 aa20.76■□□□□ 0.91
CHMP4A-211ENST00000609024 RIPK3Q9Y572 518 aa20.76■□□□□ 0.91
CHMP4A-211ENST00000609024 DNAJC25-GNG10A0A024R161 153 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 FGBP02675 491 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 ATP5JP18859 108 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 C16orf59Q7L2K0 433 aa20.75■□□□□ 0.91
CHMP4A-211ENST00000609024 CHST13Q8NET6 341 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms