RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 PDHBP11177 359 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 ZKSCAN1P17029 563 aaPredicted RBP10.6□□□□□ -0.71
LINC00343-212ENST00000608624 SLC16A2P36021 539 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 USP14P54578 494 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 MAP2K1Q02750 393 aaPredicted RBP10.6□□□□□ -0.71
LINC00343-212ENST00000608624 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 CATSPERGQ6ZRH7 1159 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 PNMA1Q8ND90 353 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 ANKS1AQ92625 1134 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 GOPCQ9HD26 462 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 BRPF3Q9ULD4 1205 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 CIZ1Q9ULV3 898 aaPredicted RBP10.6□□□□□ -0.71
LINC00343-212ENST00000608624 LHX6Q9UPM6 363 aa10.6□□□□□ -0.71
LINC00343-212ENST00000608624 WDR46O15213 610 aaKnown RBP10.59□□□□□ -0.71
LINC00343-212ENST00000608624 CA12O43570 354 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 FLOT1O75955 427 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 SNHG28P0DPA3 235 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 RPS6KB1P23443 525 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 HOXA7P31268 230 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-212ENST00000608624 MCM5P33992 734 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 HERVK_113P62684 666 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 IRX3P78415 501 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-212ENST00000608624 TOB2Q14106 344 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-212ENST00000608624 WTAPQ15007 396 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 CCDC96Q2M329 555 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 IFIT1BQ5T764 474 aaKnown RBP10.59□□□□□ -0.71
LINC00343-212ENST00000608624 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 DGKHQ86XP1 1220 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 STAG2Q8N3U4 1231 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 GMCL1Q96IK5 515 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 PARK7Q99497 189 aaKnown RBP10.59□□□□□ -0.71
LINC00343-212ENST00000608624 SH2D4AQ9H788 454 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 BTBD7Q9P203 1132 aa10.59□□□□□ -0.71
LINC00343-212ENST00000608624 ISY1Q9ULR0 285 aaKnown RBP10.59□□□□□ -0.71
LINC00343-212ENST00000608624 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 CENPFP49454 3210 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L15C9J2P7 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L13C9JLJ4 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 TMEM232C9JQI7 657 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L11C9JVI0 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L18D6R9N7 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L22D6RA61 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L17D6RBQ6 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L19D6RCP7 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L20D6RJB6 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 BCRP11274 1271 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 BMP3P12645 472 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 SLC1A4P43007 532 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 LBX1P52954 281 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 INHBEP58166 350 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 ZNF543Q08ER8 600 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 APOBRQ0VD83 1088 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 USP17L24Q0WX57 530 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 KRT32Q14532 448 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 BLOC1S2Q6QNY1 142 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 C17orf99Q6UX52 265 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 Q6ZUG5 572 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 DHX32Q7L7V1 743 aaKnown RBP10.58□□□□□ -0.72
LINC00343-212ENST00000608624 NBPF11Q86T75 865 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 ANKRD13CQ8N6S4 541 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 REPS2Q8NFH8 660 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 LPAR1Q92633 364 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 IL17RAQ96F46 866 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 PAGR1Q9BTK6 254 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 UBA5Q9GZZ9 404 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 KAT14Q9H8E8 782 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 SAGE1Q9NXZ1 904 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 SLC45A1Q9Y2W3 748 aa10.58□□□□□ -0.72
LINC00343-212ENST00000608624 EPB41L2O43491 1005 aaKnown RBP10.57□□□□□ -0.72
LINC00343-212ENST00000608624 TLR2O60603 784 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 PPFIA3O75145 1194 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 PLEKHA8P1O95397 391 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 LARGE1O95461 756 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 TROAPQ12815 778 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 Q3C1V9 767 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 NOL8Q76FK4 1167 aaKnown RBP10.57□□□□□ -0.72
LINC00343-212ENST00000608624 RUFY3Q7L099 469 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 MICU3Q86XE3 530 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 ZNF654Q8IZM8 581 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 CMTR1Q8N1G2 835 aaKnown RBP10.57□□□□□ -0.72
LINC00343-212ENST00000608624 CD99L2Q8TCZ2 262 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
LINC00343-212ENST00000608624 ZNF296Q8WUU4 475 aaPredicted RBP10.57□□□□□ -0.72
LINC00343-212ENST00000608624 DCAF4Q8WV16 495 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 BRF1Q92994 677 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 KIFC2Q96AC6 838 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 TTC14Q96N46 770 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 SLF1Q9BQI6 1058 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 CFHR5Q9BXR6 569 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 C22orf23Q9BZE7 217 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 PORCNQ9H237 461 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 MAD2L2Q9UI95 211 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 PPP1R9AQ9ULJ8 1098 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 HPS5Q9UPZ3 1129 aa10.57□□□□□ -0.72
LINC00343-212ENST00000608624 WDR19Q8NEZ3 1342 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms