RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 ORC4O43929 436 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 TRAK2O60296 914 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 MYCP01106 439 aaPredicted RBP11.82□□□□□ -0.52
CTSA-215ENST00000607187 ELNP15502 786 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 KLRC3Q07444 240 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 MTFR1Q15390 333 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 GPR142Q7Z601 462 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 CCAR1Q8IX12 1150 aaKnown RBP11.82□□□□□ -0.52
CTSA-215ENST00000607187 MB21D1Q8N884 522 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 SOCS4Q8WXH5 440 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 TSPY2A6NKD2 308 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 RAD21O60216 631 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 RANBP6O60518 1105 aaKnown RBP11.81□□□□□ -0.52
CTSA-215ENST00000607187 NDUFB10O96000 172 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
CTSA-215ENST00000607187 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
CTSA-215ENST00000607187 PDIA4P13667 645 aaKnown RBP11.81□□□□□ -0.52
CTSA-215ENST00000607187 NOVP48745 357 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 HAND2P61296 217 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 UBXN2AP68543 259 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 PPP4R3BQ5MIZ7 849 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 MORN1Q5T089 497 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 FAM83BQ5T0W9 1011 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 PLEKHH3Q7Z736 793 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 CCDC82Q8N4S0 544 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 GMCL1P1Q8NEA9 526 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 USP6NLQ92738 828 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 DSCC1Q9BVC3 393 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 NBPF3Q9H094 633 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 SPATC1LQ9H0A9 340 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 IL17RBQ9NRM6 502 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
CTSA-215ENST00000607187 FBXO28Q9NVF7 368 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 BIN2Q9UBW5 565 aaPredicted RBP11.81□□□□□ -0.52
CTSA-215ENST00000607187 PPP1R9AQ9ULJ8 1098 aa11.81□□□□□ -0.52
CTSA-215ENST00000607187 NMT2O60551 498 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 INHAP05111 366 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 CCL5P13501 91 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 EN2P19622 333 aaPredicted RBP11.8□□□□□ -0.52
CTSA-215ENST00000607187 AKNAD1Q5T1N1 836 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 CENPQQ7L2Z9 268 aaPredicted RBP11.8□□□□□ -0.52
CTSA-215ENST00000607187 LRRC47Q8N1G4 583 aaKnown RBP11.8□□□□□ -0.52
CTSA-215ENST00000607187 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 ATG4CQ96DT6 458 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 NUP88Q99567 741 aaPredicted RBP11.8□□□□□ -0.52
CTSA-215ENST00000607187 MOV10L1Q9BXT6 1211 aaKnown RBP11.8□□□□□ -0.52
CTSA-215ENST00000607187 IL25Q9H293 177 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 ZNF236Q9UL36 1845 aa11.8□□□□□ -0.52
CTSA-215ENST00000607187 VWA5AO00534 786 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 ZNF213O14771 459 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 HMGCRP04035 888 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 CYP2B6P20813 491 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 PTPREP23469 700 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 CHMLP26374 656 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 RGS2P41220 211 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 TMEM132BQ14DG7 1078 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 RRP12Q5JTH9 1297 aaKnown RBP11.79□□□□□ -0.52
CTSA-215ENST00000607187 MFSD6Q6ZSS7 791 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 TBC1D10CQ8IV04 446 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 SHCBP1Q8NEM2 672 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 DDX12PQ92771 950 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 SLF1Q9BQI6 1058 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 RNF41Q9H4P4 317 aaPredicted RBP11.79□□□□□ -0.52
CTSA-215ENST00000607187 TCP11L1Q9NUJ3 509 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 STX8Q9UNK0 236 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 RAD50Q92878 1312 aa11.79□□□□□ -0.52
CTSA-215ENST00000607187 PLXNA1Q9UIW2 1896 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 DNAH12Q6ZR08 3092 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 SMCHD1A6NHR9 2005 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 SLC15A5A6NIM6 579 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 STRNO43815 780 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 GJB1P08034 283 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 ERCC3P19447 782 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 GRB14Q14449 540 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 PLS1Q14651 629 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 WDR78Q5VTH9 848 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
CTSA-215ENST00000607187 PRPF38AQ8NAV1 312 aaKnown RBP11.78□□□□□ -0.52
CTSA-215ENST00000607187 REPS2Q8NFH8 660 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 RUFY2Q8WXA3 655 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 TRIB2Q92519 343 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 APBA2Q99767 749 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 UNC93B1Q9H1C4 597 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 MROH8Q9H579 483 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 CWC22Q9HCG8 908 aaKnown RBP11.78□□□□□ -0.52
CTSA-215ENST00000607187 TOMM22Q9NS69 142 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 ZNF214Q9UL59 606 aaPredicted RBP11.78□□□□□ -0.52
CTSA-215ENST00000607187 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
CTSA-215ENST00000607187 CEP290O15078 2479 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 SLC25A27O95847 323 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 HOXC6P09630 235 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 BMP3P12645 472 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 STAT3P40763 770 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 GJA8P48165 433 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 NT5C2P49902 561 aa11.77□□□□□ -0.53
CTSA-215ENST00000607187 IMMTQ16891 758 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms