RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 HOXA7P31268 230 aaPredicted RBP15□□□□□ -0.01
HLA-F-230ENST00000606273 GRM5P41594 1212 aa15□□□□□ -0.01
HLA-F-230ENST00000606273 RABL6Q3YEC7 729 aaPredicted RBP15□□□□□ -0.01
HLA-F-230ENST00000606273 C20orf194Q5TEA3 1177 aa15□□□□□ -0.01
HLA-F-230ENST00000606273 SLC39A5Q6ZMH5 540 aa15□□□□□ -0.01
HLA-F-230ENST00000606273 KLHDC4Q8TBB5 520 aa15□□□□□ -0.01
HLA-F-230ENST00000606273 PANK1Q8TE04 598 aa15□□□□□ -0.01
HLA-F-230ENST00000606273 MEIS3Q99687 375 aa15□□□□□ -0.01
HLA-F-230ENST00000606273 OSBPL5Q9H0X9 879 aaPredicted RBP15□□□□□ -0.01
HLA-F-230ENST00000606273 NXF1Q9UBU9 619 aaKnown RBP15□□□□□ -0.01
HLA-F-230ENST00000606273 DDX20Q9UHI6 824 aaKnown RBP15□□□□□ -0.01
HLA-F-230ENST00000606273 SYNGAP1Q96PV0 1343 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 FAM196BA6NMK8 535 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 CTDSPL2Q05D32 466 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 NR5A1Q13285 461 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 GPR142Q7Z601 462 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 SH3RF1Q7Z6J0 888 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
HLA-F-230ENST00000606273 PORCNQ9H237 461 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.99□□□□□ -0.01
HLA-F-230ENST00000606273 PRDM5Q9NQX1 630 aaPredicted RBP14.99□□□□□ -0.01
HLA-F-230ENST00000606273 PLXNB2O15031 1838 aa14.99□□□□□ -0.01
HLA-F-230ENST00000606273 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 GAKO14976 1311 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 SALL1Q9NSC2 1324 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 TRIM43BA6NCK2 446 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 USP17L5A8MUK1 530 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 MSCO60682 206 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 ZIC2O95409 532 aaPredicted RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 HERVK_113P62684 666 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 IRX3P78415 501 aaPredicted RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 PICALMQ13492 652 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 RRP1BQ14684 758 aaKnown RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 PLEKHH3Q7Z736 793 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 CCAR1Q8IX12 1150 aaKnown RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 ANKRD44Q8N8A2 993 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 LPIN2Q92539 896 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 TRIM43Q96BQ3 446 aaPredicted RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 PURBQ96QR8 312 aaKnown RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 UHRF1Q96T88 793 aaPredicted RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 APBA2Q99767 749 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 C1QTNF2Q9BXJ5 285 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 KDM4CQ9H3R0 1056 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 BICC1Q9H694 974 aaKnown RBP14.98□□□□□ -0.01
HLA-F-230ENST00000606273 ZFAND3Q9H8U3 227 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 FLRT1Q9NZU1 646 aa14.98□□□□□ -0.01
HLA-F-230ENST00000606273 SLC5A1P13866 664 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 CNGA1P29973 690 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 CAP2P40123 477 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 EPHB4P54760 987 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 ERVK-9P63128 1117 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 ERVK-24P63145 666 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 MRPS5P82675 430 aaKnown RBP14.97□□□□□ -0.01
HLA-F-230ENST00000606273 GJC2Q5T442 439 aaPredicted RBP14.97□□□□□ -0.01
HLA-F-230ENST00000606273 MFSD14CQ5VZR4 134 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 PPM1EQ8WY54 764 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 ITPKCQ96DU7 683 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 ZNF576Q9H609 170 aa14.97□□□□□ -0.01
HLA-F-230ENST00000606273 ITGB8P26012 769 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 BACE1P56817 501 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 SNX17Q15036 470 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 SKIV2LQ15477 1246 aaKnown RBP14.96□□□□□ -0.01
HLA-F-230ENST00000606273 TRIM60Q495X7 471 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 ARRDC4Q8NCT1 418 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 RNPC3Q96LT9 517 aaKnown RBP14.96□□□□□ -0.01
HLA-F-230ENST00000606273 WDR18Q9BV38 432 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 AS3MTQ9HBK9 375 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 PDLIM7Q9NR12 457 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 THEGQ9P2T0 379 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 PHIPQ8WWQ0 1821 aa14.96□□□□□ -0.01
HLA-F-230ENST00000606273 AK9Q5TCS8 1911 aa14.96□□□□□ -0.02
HLA-F-230ENST00000606273 MAGEB6P1A0A0J9YX57 407 aa14.95□□□□□ -0.02
HLA-F-230ENST00000606273 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.95□□□□□ -0.02
HLA-F-230ENST00000606273 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.95□□□□□ -0.02
HLA-F-230ENST00000606273 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
HLA-F-230ENST00000606273 GNL3LQ9NVN8 582 aaKnown RBP14.95□□□□□ -0.02
HLA-F-230ENST00000606273 TMOD4Q9NZQ9 345 aa14.95□□□□□ -0.02
HLA-F-230ENST00000606273 PTPRFP10586 1907 aa14.95□□□□□ -0.02
HLA-F-230ENST00000606273 BTDP43251 543 aa14.94□□□□□ -0.02
HLA-F-230ENST00000606273 AKNAD1Q5T1N1 836 aa14.94□□□□□ -0.02
HLA-F-230ENST00000606273 C1orf53Q5VUE5 145 aa14.94□□□□□ -0.02
HLA-F-230ENST00000606273 ITPRIPQ8IWB1 547 aa14.94□□□□□ -0.02
HLA-F-230ENST00000606273 TRPV1Q8NER1 839 aa14.94□□□□□ -0.02
HLA-F-230ENST00000606273 FAM117AQ9C073 453 aa14.94□□□□□ -0.02
HLA-F-230ENST00000606273 DENND2AQ9ULE3 1009 aa14.94□□□□□ -0.02
HLA-F-230ENST00000606273 C19orf81C9J6K1 198 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 EYA2O00167 538 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 IGHA2P01877 340 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 UBTFL1P0CB47 393 aaPredicted RBP14.93□□□□□ -0.02
HLA-F-230ENST00000606273 CYP2C19P33261 490 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 RHBDL3P58872 404 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 INSM1Q01101 510 aaPredicted RBP14.93□□□□□ -0.02
HLA-F-230ENST00000606273 ATP2B2Q01814 1243 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 TIFAQ96CG3 184 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 PAGR1Q9BTK6 254 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 TACC3Q9Y6A5 838 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 NDUFB9Q9Y6M9 179 aa14.93□□□□□ -0.02
HLA-F-230ENST00000606273 MAST2Q6P0Q8 1798 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms