RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZBED4O75132 1171 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
CTSA-211ENST00000606066 SNHG28P0DPA3 235 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 LIFRP42702 1097 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 NFXL1Q6ZNB6 911 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 TXNRD2Q9NNW7 524 aa16.68■□□□□ 0.26
CTSA-211ENST00000606066 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 VWA5AO00534 786 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 SH2B2O14492 632 aaPredicted RBP16.67■□□□□ 0.26
CTSA-211ENST00000606066 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
CTSA-211ENST00000606066 HOXD10P28358 340 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 PSMC4P43686 418 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 FXR1P51114 621 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTSA-211ENST00000606066 ANAPC15P60006 121 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 FGD1P98174 961 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
CTSA-211ENST00000606066 ZNF543Q08ER8 600 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 ASPRV1Q53RT3 343 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 LY9Q9HBG7 655 aa16.67■□□□□ 0.26
CTSA-211ENST00000606066 FRMPD2Q68DX3 1309 aaPredicted RBP16.67■□□□□ 0.26
CTSA-211ENST00000606066 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
CTSA-211ENST00000606066 CNMDO75829 334 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 SEC24BO95487 1268 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
CTSA-211ENST00000606066 MAPK4P31152 587 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 Q3C1V9 767 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 POTEEQ6S8J3 1075 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 BTNL9Q6UXG8 535 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 SYNE3Q6ZMZ3 975 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 CWC22Q9HCG8 908 aaKnown RBP16.66■□□□□ 0.26
CTSA-211ENST00000606066 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 BTBD7Q9P203 1132 aa16.66■□□□□ 0.26
CTSA-211ENST00000606066 DDAH1O94760 285 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 CALM1P0DP23 149 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 CALM2P0DP24 149 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 CALM3P0DP25 149 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 COPB2P35606 906 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 OAZ1P54368 228 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 PLS1Q14651 629 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 TMEM132BQ14DG7 1078 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 COA7Q96BR5 231 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 MAP3K14Q99558 947 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 SPATC1LQ9H0A9 340 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 UPF2Q9HAU5 1272 aaKnown RBP16.65■□□□□ 0.26
CTSA-211ENST00000606066 SLC38A10Q9HBR0 1119 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 PRR12Q9ULL5 1215 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
CTSA-211ENST00000606066 RANBP2P49792 3224 aaKnown RBP16.65■□□□□ 0.26
CTSA-211ENST00000606066 SLC25A27O95847 323 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 STAT3P40763 770 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 TROAPQ12815 778 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 SYDE2Q5VT97 1194 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 TTBK2Q6IQ55 1244 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 RUFY3Q7L099 469 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 ZNF654Q8IZM8 581 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 SHCBP1Q8NEM2 672 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 CTCFLQ8NI51 663 aaPredicted RBP16.64■□□□□ 0.25
CTSA-211ENST00000606066 NUP133Q8WUM0 1156 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 TEX13BQ9BXU2 312 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 ARHGAP39Q9C0H5 1083 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 GPHNQ9NQX3 736 aaPredicted RBP16.64■□□□□ 0.25
CTSA-211ENST00000606066 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
CTSA-211ENST00000606066 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
CTSA-211ENST00000606066 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 PEX10O60683 326 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
CTSA-211ENST00000606066 GOLGA8HP0CJ92 632 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 KIF5BP33176 963 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 SLC16A2P36021 539 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
CTSA-211ENST00000606066 GRM4Q14833 912 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 FBXL16Q8N461 479 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 REPS2Q8NFH8 660 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 TCEANC2Q96MN5 208 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 MOV10L1Q9BXT6 1211 aaKnown RBP16.63■□□□□ 0.25
CTSA-211ENST00000606066 MROH8Q9H579 483 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
CTSA-211ENST00000606066 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
CTSA-211ENST00000606066 CEP290O15078 2479 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 PALM3A6NDB9 673 aaPredicted RBP16.62■□□□□ 0.25
CTSA-211ENST00000606066 CPA1P15085 419 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 GNAQP50148 359 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 WDR78Q5VTH9 848 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 Q6ZUG5 572 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 PLEKHH3Q7Z736 793 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 NCAPG2Q86XI2 1143 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
CTSA-211ENST00000606066 CPXCR1Q8N123 301 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms