RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 LRRC15Q8TF66 581 aa13.35□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 CEP95Q96GE4 821 aa13.35□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 VPS16Q9H269 839 aa13.35□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 BARHL2Q9NY43 387 aa13.35□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 FLT1P17948 1338 aa13.35□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 GPR75-ASB3A0A0A6YYF3 556 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 RHBDL3P58872 404 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 PICALMQ13492 652 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 DTHD1Q6ZMT9 781 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 CLEC10AQ8IUN9 316 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 SH3GLB2Q9NR46 395 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 TRIM49BA6NDI0 452 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 AKR1B15C9JRZ8 316 aaPredicted RBP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 ZSCAN12O43309 604 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 RPN1P04843 607 aaKnown RBP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 CASP14P31944 242 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 PRCPP42785 496 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 EIF6P56537 245 aaKnown RBP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 GNG11P61952 73 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 CRY2Q49AN0 593 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 ARL6IP4Q66PJ3 421 aaKnown RBP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 TBC1D16Q8TBP0 767 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 ROBO3Q96MS0 1386 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 LONP1P36776 959 aaKnown RBP13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 GNAQP50148 359 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 NAPAP54920 295 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 GTF2IP78347 998 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 KRT31Q15323 416 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 LETM2Q2VYF4 491 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 NELFBQ8WX92 580 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 MXD3Q9BW11 206 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 ZMYND15Q9H091 742 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 MRPL44Q9H9J2 332 aaKnown RBP13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 DISC1Q9NRI5 854 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 TCP11L1Q9NUJ3 509 aa13.33□□□□□ -0.27
HMGN3-AS1-201ENST00000604516 RNF225M0QZC1 329 aaPredicted RBP13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CCP110O43303 1012 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SLURP2P0DP57 97 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 IL1R1P14778 569 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 FXR1P51114 621 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ST5P78524 1137 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 DDR1Q08345 913 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PPFIBP1Q86W92 1011 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TAB2Q9NYJ8 693 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 FRMPD2Q68DX3 1309 aaPredicted RBP13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 N4BP3O15049 544 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TXLNAP40222 546 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PBX1P40424 430 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 UBA7P41226 1012 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PMS1P54277 932 aaKnown RBP13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PAK1Q13153 545 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 RAD9BQ6WBX8 426 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PIGSQ96S52 555 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 LZTFL1Q9NQ48 299 aa13.33□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SMCO2A6NFE2 343 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CCNT1O60563 726 aaKnown RBP13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TMED8Q6PL24 325 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 RBM17Q96I25 401 aaKnown RBP13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SNED1Q8TER0 1413 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 GYPCP04921 128 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZNF658Q5TYW1 1059 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 C15orf52Q6ZUT6 534 aaKnown RBP13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CCDC148Q8NFR7 591 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CERKQ8TCT0 537 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CARD6Q9BX69 1037 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 BIN2Q9UBW5 565 aaPredicted RBP13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 MAST2Q6P0Q8 1798 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 FCHSD1Q86WN1 690 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 AFF2P51816 1311 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 IGSF3O75054 1194 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TXNRD1Q16881 649 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CT47A1Q5JQC4 288 aaPredicted RBP13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 LRRC47Q8N1G4 583 aaKnown RBP13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZNF397Q8NF99 534 aaPredicted RBP13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZMYND12Q9H0C1 365 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TMEM260Q9NX78 707 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TRIM37O94972 964 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CCDC178Q5BJE1 867 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CTAGE1Q96RT6 745 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms