RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 TBC1D8O95759 1140 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 OTUD6AQ7L8S5 288 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 FAM114A2Q9NRY5 505 aa23.18■■□□□ 1.3
SH3D19-211ENST00000604030 CTSWP56202 376 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 DMTNQ08495 405 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 GPBP1Q86WP2 473 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 ZNF496Q96IT1 587 aaPredicted RBP23.17■■□□□ 1.3
SH3D19-211ENST00000604030 PPM1FP49593 454 aaPredicted RBP23.17■■□□□ 1.3
SH3D19-211ENST00000604030 AK8Q96MA6 479 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 PDE6AP16499 860 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 EPHB4P54760 987 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 CCDC151A5D8V7 595 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 ZBED4O75132 1171 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 NT5C2P49902 561 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 PYCARDQ9ULZ3 195 aa23.17■■□□□ 1.3
SH3D19-211ENST00000604030 TAF5LO75529 589 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 VCX3AQ9NNX9 186 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 RAB20Q9NX57 234 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 RCOR1Q9UKL0 485 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 SOS2Q07890 1332 aaPredicted RBP23.16■■□□□ 1.3
SH3D19-211ENST00000604030 GNPATO15228 680 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 COL4A3BPQ9Y5P4 624 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 GUCY2FP51841 1108 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 RNASELQ05823 741 aaKnown RBP23.16■■□□□ 1.3
SH3D19-211ENST00000604030 STAMQ92783 540 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 HAUS1Q96CS2 278 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 RNF26Q9BY78 433 aaPredicted RBP23.16■■□□□ 1.3
SH3D19-211ENST00000604030 A1BGP04217 495 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 HARSP12081 509 aaKnown RBP23.16■■□□□ 1.3
SH3D19-211ENST00000604030 PASKQ96RG2 1323 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 EFCAB13Q8IY85 973 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 Q9H521 79 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 TRPC6Q9Y210 931 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 USTQ9Y2C2 406 aa23.16■■□□□ 1.3
SH3D19-211ENST00000604030 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
SH3D19-211ENST00000604030 LMNB2Q03252 620 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 AOC3Q16853 763 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 TNKSO95271 1327 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 HADHQ16836 314 aaKnown RBP23.15■■□□□ 1.3
SH3D19-211ENST00000604030 SUPT20HQ8NEM7 779 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 PPP4R1Q8TF05 950 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 CHURC1Q8WUH1 139 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 GBP5Q96PP8 586 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 ZNF521Q96K83 1311 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 PPP1R2P3Q6NXS1 205 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 ZBTB9Q96C00 473 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 LARSQ9P2J5 1176 aaKnown RBP23.15■■□□□ 1.3
SH3D19-211ENST00000604030 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 BRDTQ58F21 947 aaPredicted RBP23.15■■□□□ 1.3
SH3D19-211ENST00000604030 PICK1Q9NRD5 415 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 PKD2L1Q9P0L9 805 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 TBC1D7Q9P0N9 293 aa23.15■■□□□ 1.3
SH3D19-211ENST00000604030 SCRN1Q12765 414 aa23.14■■□□□ 1.3
SH3D19-211ENST00000604030 SPZ1Q9BXG8 430 aa23.14■■□□□ 1.3
SH3D19-211ENST00000604030 ANTXR1Q9H6X2 564 aa23.14■■□□□ 1.3
SH3D19-211ENST00000604030 ARHGEF5Q12774 1597 aa23.14■■□□□ 1.3
SH3D19-211ENST00000604030 PKP1Q13835 747 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 ZMYM1Q5SVZ6 1142 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 PALM2Q8IXS6 379 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 SLC17A8Q8NDX2 589 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 MUM1Q2TAK8 710 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 FAM26FQ5R3K3 315 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 EXOC4Q96A65 974 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 FGAP02671 866 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 SP4Q02446 784 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 PLEKHF1Q96S99 279 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 KRT12Q99456 494 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 PCDHA12Q9UN75 941 aa23.14■■□□□ 1.29
SH3D19-211ENST00000604030 GAS7O60861 476 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 ARHGAP44Q17R89 818 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 CCDC13Q8IYE1 715 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 RSAD2Q8WXG1 361 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 MRRFQ96E11 262 aaKnown RBP23.13■■□□□ 1.29
SH3D19-211ENST00000604030 PANK4Q9NVE7 773 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 PCDHA5Q9Y5H7 936 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 HMGB1P1B2RPK0 211 aaPredicted RBP23.13■■□□□ 1.29
SH3D19-211ENST00000604030 LMNB1P20700 586 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 ADD1P35611 737 aaKnown RBP23.13■■□□□ 1.29
SH3D19-211ENST00000604030 AZI2Q9H6S1 392 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 HSPA6P17066 643 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 NLRX1Q86UT6 975 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 FNBP4Q8N3X1 1017 aaPredicted RBP23.13■■□□□ 1.29
SH3D19-211ENST00000604030 ANKRD42Q8N9B4 389 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 RABEP2Q9H5N1 569 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 PDE11AQ9HCR9 933 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 EIF3CLB5ME19 914 aaKnown RBP23.13■■□□□ 1.29
SH3D19-211ENST00000604030 SUN1O94901 812 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 MYCBPQ99417 103 aaPredicted RBP23.13■■□□□ 1.29
SH3D19-211ENST00000604030 EIF3CQ99613 913 aaKnown RBP23.13■■□□□ 1.29
SH3D19-211ENST00000604030 JAG2Q9Y219 1238 aa23.13■■□□□ 1.29
SH3D19-211ENST00000604030 CD19P15391 556 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
SH3D19-211ENST00000604030 RNF34Q969K3 372 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 BTBD18B2RXH4 712 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 SNCBQ16143 134 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 NSMCE1Q8WV22 266 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 ATP10AO60312 1499 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 ENOX1Q8TC92 643 aaKnown RBP23.12■■□□□ 1.29
SH3D19-211ENST00000604030 RILPQ96NA2 401 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms